ggKbase home page

H2-18-all-fractions_k255_3154316

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_3154316_1
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1042)
DNA (1041bp) protein (347aa)
2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:KFI05171.1}; EC=1.3.1.34 {ECO:0000313|EMBL:KFI05171.1};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
2,4-dienoyl-CoA reductase [NADPH] (EC:1.3.1.34)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E3M2_9BURK
H2-18-all-fractions_k255_3154316_2
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1203..1658)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036CC76C
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CDG85759.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H2-18-all-fractions_k255_3154316_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1714..2163)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D0E64
Uncharacterized protein {ECO:0000313|EMBL:KGF82286.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H2-18-all-fractions_k255_3154316_4
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2231..3187)
DNA (957bp) protein (319aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pip; proline iminopeptidase (EC:3.4.11.5)
Proline iminopeptidase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIE7_9BURK
H2-18-all-fractions_k255_3154316_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3239..4561)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003759D9B
Serine deaminase {ECO:0000313|EMBL:KGF82288.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative serine dehydratase domain protein
H2-18-all-fractions_k255_3154316_6
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4558..4860)
DNA (303bp) protein (101aa)
XRE family plasmid maintenance system antidote protein n=1 Tax=Salmonella enterica subsp. enterica serovar Montevideo str. 366867 RepID=E8A5F7_SALMO
XRE family transcriptional regulator {ECO:0000313|EMBL:KJL92799.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
XRE family transcriptional regulator
H2-18-all-fractions_k255_3154316_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5160..5900)
DNA (741bp) protein (247aa)
phbB-2; acetoacetyl-CoA reductase (EC:1.1.1.36)
Acetoacetyl-CoA reductase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E3M7_9BURK
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:KGF82291.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_3154316_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5950..7128)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase n=1 Tax=Massilia niastensis RepID=UPI00035E0AEA
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KFC62181.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
acetyl-CoA acetyltransferases family protein
H2-18-all-fractions_k255_3154316_9
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7505..8269
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D5911
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
minC; septum site-determining protein MinC
H2-18-all-fractions_k255_3154316_10
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8306..9121
DNA (816bp) protein (272aa)
cell division inhibitor MinD n=1 Tax=Janthinobacterium lividum RepID=UPI00028A323C
minD; septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H2-18-all-fractions_k255_3154316_11
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9123..9374
DNA (252bp) protein (84aa)
cell division topological specificity factor MinE n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035E7D44
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
minE; cell division topological specificity factor MinE
H2-18-all-fractions_k255_3154316_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9433..9936)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PK64_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF82296.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized protein
H2-18-all-fractions_k255_3154316_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10138..10827
DNA (690bp) protein (230aa)
Two-component transcriptional regulator, winged helix family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PJF9_9BURK
XRE family transcriptional regulator {ECO:0000313|EMBL:KGF82297.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ompR1; two-components system response regulator
H2-18-all-fractions_k255_3154316_14
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10894..12168
DNA (1275bp) protein (425aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
glutamyl-tRNA reductase n=1 Tax=Massilia niastensis RepID=UPI00036F6155
H2-18-all-fractions_k255_3154316_15
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12268..13332
DNA (1065bp) protein (355aa)
peptide chain release factor 1 n=1 Tax=Massilia niastensis RepID=UPI00037A4353
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
prfA; peptide chain release factor 1
H2-18-all-fractions_k255_3154316_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13614..14084
DNA (471bp) protein (157aa)
Disulfide bond formation protein B n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E3N7_9BURK
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
disulfide bond formation DsbB family protein
H2-18-all-fractions_k255_3154316_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14081..14917
DNA (837bp) protein (279aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hemK; protein-(glutamine-N5) methyltransferase, release factor-specific (EC:2.1.1.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003668FA4
H2-18-all-fractions_k255_3154316_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15026..16831
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036ADD76
Uncharacterized protein {ECO:0000313|EMBL:KGF82302.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H2-18-all-fractions_k255_3154316_19
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16910..18505
DNA (1596bp) protein (532aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
gshA; glutamate--cysteine ligase (EC:6.3.2.2)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000361A7D9
H2-18-all-fractions_k255_3154316_20
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18519..19562
DNA (1044bp) protein (348aa)
acetylpolyamine aminohydrolase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A0A96
aphA; acetylpolyamine aminohydrolase
Acetylpolyamine aminohydrolase AphA {ECO:0000313|EMBL:ELX11795.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
H2-18-all-fractions_k255_3154316_21
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19622..20074
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000364AEFD
Acetyltransferase {ECO:0000313|EMBL:KFI05189.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
acetyltransferase family protein
H2-18-all-fractions_k255_3154316_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20294..21595)
DNA (1302bp) protein (434aa)
Alpha-ketoglutarate transporter n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S5Y8_9RALS
Alpha-ketoglutarate permease {ECO:0000313|EMBL:KGF82306.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
kgtP; alpha-ketoglutarate permease
H2-18-all-fractions_k255_3154316_23
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21618..22853)
DNA (1236bp) protein (412aa)
pcaF; beta-ketoadipyl-CoA thiolase (EC:2.3.1.16)
Beta-ketoadipyl CoA thiolase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GAS7_9BURK
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:EOA06604.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
H2-18-all-fractions_k255_3154316_24
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22877..23521)
DNA (645bp) protein (215aa)
pcaJ; 3-oxoadipate CoA-transferase subunit B (EC:2.8.3.6)
3-oxoacid CoA-transferase, B subunit n=1 Tax=Herbaspirillum sp. CF444 RepID=J2TSY0_9BURK
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EJL81847.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
H2-18-all-fractions_k255_3154316_25
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23521..24189)
DNA (669bp) protein (223aa)
pcaI; 3-oxoadipate CoA-transferase subunit A (EC:2.8.3.6)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D066_9BURK
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:EJL81846.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
H2-18-all-fractions_k255_3154316_26
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24399..25229
DNA (831bp) protein (277aa)
IclR family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8ISQ8_HERSS
pcaR; IclR family transcription regulator protein
IclR family transcription regulator protein {ECO:0000313|EMBL:ADJ65474.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
H2-18-all-fractions_k255_3154316_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25300..25734)
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fbp; peptidyl-prolyl cis-trans isomerase domain protein (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIG3_9BURK
H2-18-all-fractions_k255_3154316_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25811..27688)
DNA (1878bp) protein (626aa)
Probable potassium transport system protein kup n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PLN7_9BURK
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
K+ potassium transporter family protein
H2-18-all-fractions_k255_3154316_29
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27774..28742)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037C6A7D
Uncharacterized protein {ECO:0000313|EMBL:KDB50635.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
Displaying 29 items

View Taxonomy