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H2-18-all-fractions_k255_2829414_8

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(6743..10189)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 1148.0
  • Bit_score: 2100
  • Evalue 0.0
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 1148.0
  • Bit_score: 1961
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Massilia niastensis RepID=UPI000375E883 similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 1148.0
  • Bit_score: 2103
  • Evalue 0.0

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Taxonomy

Massilia timonae → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3447
ATGCCTTTCGATCTCAAAAAGAACCTTCCTAAACCAGGTCATCGATTTGCCCTGCCGACCCTGCACGGCTCGTCCGACGCCTATGCCTTGGCGGTCGCCGCGCTCGAGCTCAAGGCCGACAAGCGGATGCTGACCGTGATCGTGGCGAACGCCAGCGACGGCCAGCGCCTGCTCGACGAGATCCCGTGGTTCGCGGACGGCAAGCTGGCGTGCCACCTGCTGCCGGACTGGGAAACCCTGCCTTACGATGCGTTCTCGCCGCACCAGGACCTGGTGTCCGAACGCCTCGCGACCCTGCACGAAATACGCAACGGCCAGTGCGACGTGCTGCTGGTGCCGGCCACCACTGCGCTGGTGCGCCTCGCGCCGCCGTCCTTCCTGGCCGCCTACACCTTCTTCTTCCGGCAAGGCGAACACCTCGACGAGGCCAAACTCAAGGCGCAGCTGACGCTGGCCGGCTACACCCATGTGTCGCAGGTCATGTCGCCGGGCGAGTACTCGGTGCGCGGCGGCCTGATCGACCTGTTCCCGATGGGCTCCGCGCTGCCCTACCGGCTCGACCTGTTCGGCGACGAGATCGAAACCATCCGCACCTTCGACGCCGACACCCAGCGCTCGCTGTACCCGGTCCGCGAAGTGCGGCTGCTGCCGGGCCGCGAATTCCCGATGGACGAAGCGTCGCGCACCGCGTTTCGCGGGCGCTGGCGCGAGCGCTTCGAGGGCGACCCGTCGCGCGCGCCGGTCTACCGCGACATCGGCAACGGCATCGCCTCGGCCGGCATCGAATACTACCTGCCGCTGTTCTTCGACCAGACCGCAACCCTGTTCGACTACCTGCCCGACGCGGCGCCGCTCGCGCTGGTGGGCGACATCGACAGCGCGATCCAGCGCTTCTGGCTCGACACCGAATCGCGCTACCGCTTTTTGAAGACCGACCGCGAGCGGCCGATCCTGCCGCCCGAGGAGCTGTTCCTCGGCGCCGAGCAGTTCTTCACGCTGGCCAAGCCGCACGGGCGCTGGGCCATCGCCAAGGATGCTGGCGCGCCGGCGTCGGAGCTGTCGGCGCCGGTCCCCGACATCGCGGTCAATCGCCGCCTTGAAGATCCGCTTGCCAACCTGCGCTCCTACCTGATGCGGGCCGATGCGCGGGTGATGATCTGCGCCGAATCGAACGGCCGCCGCGAGACGCTGCAGCAGTACTTCAACGAATACAAGCTGGACCTGGCCGCGGTCGACGGCTTCGAGGGCATGCGCGCATCGAACGCAAGGGTTGCCCTTGGGGTCGCGCCGCTGCAGGCTGGCTTCGAGCTGCTCGAAGCATCGGCGGGCCAGCTGGTCTTCATCACCGAGACCGAACTGTATGCGGGCGCCGGCCGCCGCGCCGGCAAAAAGAAGCAGGAAGCGACCAGCCAGGTCGAGTCGATGGTGCGCGACCTGTCGGAGCTCAAGATCGGCGACCCGGTGGTCCACATCAACCACGGCATCGGCCGCTACATGGGCCTGGCCAGCATGGACCTGGGCGAAGGCGAGACCGAGTTCCTGCACCTCGAATACGCGAAGGACACCAAGCTGTACGTGCCGGTGTCGCAGCTGCACGTGATTTCGCGCTACTCGGGCGCCGCGCCCGAGGACGCGCCGCTGCACACGCTCGGCTCGGGCCAGTGGGAAAAGGCCAAGCGCAAGGCGGCCGAACAGGTGCGCGACACCGCCGCCGAACTGCTCAACCTGTACGCGCGCCGCGCCGCGCGCCAGGGCCATTCCTTCGAATACTCCGCCGTCGACTACGAAAACTTCGCCCAGAGCTTCGGCTTCGAGGAGACCCCCGACCAGCACGAAGCCATCATCAACGTGATCCGCGACATGACCTCGGGCCGCCCGATGGACCGGCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAAGTGGCGCTGCGCGCGGCCTTCATTGCGGTCATGGGCGGCAAACAGGTGGCGATCCTGGCGCCGACCACGCTGCTGGCCGAACAGCACGCGCAAACGTTTGCCGACCGCTTCGCCGACTGGCCCGTCAAGATCGCCGAGCTGTCGCGCTTCCGGACCGGCAAGGAGATCAACAACGCGATCAAGGGCATGGCCGACGGCACCCTCGACATCGTGATCGGCACCCACAAGCTGCTCTCGCCCGACGTCAAGTTCACCCGGCTCGGCCTGGTCATCATCGACGAGGAGCACCGCTTCGGCGTGCGCCAGAAGGAAGCGTTGAAGGCCTTGCGCGCCGAGGTCGACGTGCTGACCCTGACCGCGACCCCGATCCCGCGCACGCTGGGCATGGCGCTGGAAGGCCTGCGCGACTTTTCGATCATCGCCACCGCGCCCCAGAAGCGCCTCGCGATCAAGACCTTCGTGCGCGGCGAGGACGGCTCGGTGGTCCGCGAAGCCTGCCTGCGCGAACTCAAGCGCGGCGGCCAGATCTACTTCCTGCACAACGAAGTCGAGACCATCGAGAACCGCCGCGCGATGCTGGAAGAGCTGCTGCCCGAAGCCCGCATCGGCGTCGCGCACGGCCAGATGCACGAGCGCGACCTGGAAAAGGTGATGCGCGATTTCGTCGCCCAGCGCTTCAACATCCTGCTGTGCACGACCATCATCGAGACCGGCATCGACGTGCCGACCGCGAACACGATCATCATGCACCGCGCCGACAAGTTCGGCCTGGCGCAGCTGCACCAGCTGCGCGGCCGCGTCGGCCGTTCGCACCACCAGGCCTACGCCTACCTGCTGGTGAACGACGTGATGGGCCTGTCCAAACAGGCGCAGCGCCGGCTCGACGCGATCCAGCAGATGGAAGAACTGGGCAGCGGCTTCTACCTGGCGATGCACGACCTCGAGATCCGCGGCGCCGGCGAAGTGCTGGGCGAGAACCAGTCGGGCGAAATGCTCGAAATCGGCTTCCAGCTGTATTCGGACATGCTCAACGAGGCGGTGCGCTCGCTCAAGGCCGGCAAGGAGCCGGACATGTCGGCGCCGCTGGCCACCACCACCGAGATCAACCTGCACGTGCCCGCCCTGCTGCCGGCCGACTTCTGCGGCGACGTGCACGAGCGGCTGTCGATCTACAAGCGGCTTGCCAACTGCGAAAGCCAGGGCAAGATCGACGACATGCAGGAAGAGCTGATCGACCGCTTCGGCAAGCTGCCGGAGCCGGTCAAGGCGCTGATCGAGACCCACCGCCTGCGCATTTCGGCGAAAATGGTCGGCATCACCAAGATCGACGTCCACGGCGAGGCGGCCAGCCTGCAGTTCATGGAAAAGCCGCCGATCGACCCGATCAAGATCATCACGCTGATCCAGAAGAACCGCCATATCAAGCTGGCTGGCCAGGACAAGCTGCGCATCACCGCCAGCATGCCCGACCTGGGCGCGCGCGTGACGCAGGTGAAGCAAACCATCAAACAACTGCTGGCATAA
PROTEIN sequence
Length: 1149
MPFDLKKNLPKPGHRFALPTLHGSSDAYALAVAALELKADKRMLTVIVANASDGQRLLDEIPWFADGKLACHLLPDWETLPYDAFSPHQDLVSERLATLHEIRNGQCDVLLVPATTALVRLAPPSFLAAYTFFFRQGEHLDEAKLKAQLTLAGYTHVSQVMSPGEYSVRGGLIDLFPMGSALPYRLDLFGDEIETIRTFDADTQRSLYPVREVRLLPGREFPMDEASRTAFRGRWRERFEGDPSRAPVYRDIGNGIASAGIEYYLPLFFDQTATLFDYLPDAAPLALVGDIDSAIQRFWLDTESRYRFLKTDRERPILPPEELFLGAEQFFTLAKPHGRWAIAKDAGAPASELSAPVPDIAVNRRLEDPLANLRSYLMRADARVMICAESNGRRETLQQYFNEYKLDLAAVDGFEGMRASNARVALGVAPLQAGFELLEASAGQLVFITETELYAGAGRRAGKKKQEATSQVESMVRDLSELKIGDPVVHINHGIGRYMGLASMDLGEGETEFLHLEYAKDTKLYVPVSQLHVISRYSGAAPEDAPLHTLGSGQWEKAKRKAAEQVRDTAAELLNLYARRAARQGHSFEYSAVDYENFAQSFGFEETPDQHEAIINVIRDMTSGRPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVAILAPTTLLAEQHAQTFADRFADWPVKIAELSRFRTGKEINNAIKGMADGTLDIVIGTHKLLSPDVKFTRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSIIATAPQKRLAIKTFVRGEDGSVVREACLRELKRGGQIYFLHNEVETIENRRAMLEELLPEARIGVAHGQMHERDLEKVMRDFVAQRFNILLCTTIIETGIDVPTANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVNDVMGLSKQAQRRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGEMLEIGFQLYSDMLNEAVRSLKAGKEPDMSAPLATTTEINLHVPALLPADFCGDVHERLSIYKRLANCESQGKIDDMQEELIDRFGKLPEPVKALIETHRLRISAKMVGITKIDVHGEAASLQFMEKPPIDPIKIITLIQKNRHIKLAGQDKLRITASMPDLGARVTQVKQTIKQLLA*