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H2-18-all-fractions_k255_4567116_4

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(2766..3656)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DB64_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 296.0
  • Bit_score: 542
  • Evalue 2.00e-151
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 296.0
  • Bit_score: 542
  • Evalue 2.80e-151
rpoH; alternative sigma factor RpoH similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 296.0
  • Bit_score: 521
  • Evalue 1.40e-145

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Taxonomy

Massilia timonae → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGTCCGCACAATCCGCATTGGTTCCGACCGGCAGTCGTGCTCTGGGACTGGGTTTCACTGGCAATCTGGGCAACATCGACGCCTACATTTCGGCTGTCAACCGCCTGCCGATGCTGTCCCACGAAGAAGAAGTGTCGCTGGCGAAGCGGCTGCAGGAACAGAACGATCTGGACGCCGCACAGAAACTGGTGATGTCCCACCTGCGCCTGGTGGTCTCGATCGCGCGCGGCTATCTCGGCTACGGCCTGCCGCACGCCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCAGTCAAGCGCTTCGACCCGAACCAGGGCGTGCGCCTGGTGTCGTACGCGATGCACTGGATCAAGGCCGAGATGCACGAATACATCTTGAAGAACTGGCGCCTGGTGAAGGTCGCGACGACCAAGGCCCAGCGCAAGCTGTTCTTCAACCTGCGCAGTAACAAGACCAGCCTGGACGCGATGACGCCGGGCCAGGTCGACGAGCTGGCGAAGATGCTCGACGTCAAGCGCGAGGAAGTGATCGAGATGGAAACCCGCCTGTCGGGCCGCGACATCGCGCTCGAAGCGCCGACCGACGACGAAGACGACAAGTTCTCGCCGATCGCTTACCTGTCGTCCGAGCTGTCGGAGCCGACCAAGGTACTTGAGGCCGAACAGGTGACGCGCCTGCAGTCCGAAGGGCTTGAGACCGCGCTGTCGAAGCTGGACCCGCGTTCGCGCCGCATCGTCGAGGCGCGCTGGCTGGCCAACGACGATGGCTCGGGCGCCACGCTGCACACGCTGGCCGAGGAGTTCGGCGTGTCGGCCGAGCGCATCCGCCAGATCGAATCGGCCGCGCTGAAGAAGATGAAAGGCTCGCTCGCCGCGTTCGTCTGA
PROTEIN sequence
Length: 297
MSAQSALVPTGSRALGLGFTGNLGNIDAYISAVNRLPMLSHEEEVSLAKRLQEQNDLDAAQKLVMSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPNQGVRLVSYAMHWIKAEMHEYILKNWRLVKVATTKAQRKLFFNLRSNKTSLDAMTPGQVDELAKMLDVKREEVIEMETRLSGRDIALEAPTDDEDDKFSPIAYLSSELSEPTKVLEAEQVTRLQSEGLETALSKLDPRSRRIVEARWLANDDGSGATLHTLAEEFGVSAERIRQIESAALKKMKGSLAAFV*