ggKbase home page

H2-18-all-fractions_k255_688773_18

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 20900..21619

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D21D8 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 183.0
  • Bit_score: 238
  • Evalue 6.60e-60
RNA polymerase sigma factor {ECO:0000313|EMBL:KGF82593.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 179.0
  • Bit_score: 226
  • Evalue 2.10e-56
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 187.0
  • Bit_score: 221
  • Evalue 2.40e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGCGTGCCGACTCATTTCCCGTCTTGCGGTCTAACGTCGACCGTGCCGCCGCAGGCGCTTGCGCGATTGGAGCGCCTGGGGGCGACGCGCGCTTGATGGCGGATAAGGGGAAACGCGGCATGCACAGCTGGGATGGCGGTGCGGGCACGCCGGCCTCGTGCCCAACCATGGCCGACGCCAACGACGCCCGCCTGCTCGGGCAGGTCGCCGATGGCGACAGGTTTGCGTTCGAGCTGCTGTACCGCGGCTATTTCCCGCGCCTGACACGATTCCTGAACCGCATGACGCGCAACCTGCAACTGGTCGAGGAAATCGTGAACGACACCATGCTGGTGGTCTGGCGCAAGGCGCCGACGTACAACGCGACCTGCAAGGTGTCGACCTGGGTGTTCGCGATCGCGTACCGCAAGGCGCGCAAGGCGATCGCGGCGTTCGACGAGCCGGTCGATGCCGAGCCCGATTTGCGCGAGGCCGAGCCCGACTGCCAGCCGGAACACCAGTTCCAGTCGCGGCGCCGGCAGCAGGCGGTCGGCGCCGCGCTCGAGCGCCTGCCGCTGGAGCAGCGCACCGTGGTGCAGCTGACCTACTTCCACGAGATGGCCTACGCCGACATTGCCGAGATCATGGGCTGCCCGCTGAACACGGTCAAGACGCGCATGTTCCACGCCCGCCGCCGCCTTGCCGCGTTGCTCGTCAACCGGCTGGAGGAAGAATCATGA
PROTEIN sequence
Length: 240
VRADSFPVLRSNVDRAAAGACAIGAPGGDARLMADKGKRGMHSWDGGAGTPASCPTMADANDARLLGQVADGDRFAFELLYRGYFPRLTRFLNRMTRNLQLVEEIVNDTMLVVWRKAPTYNATCKVSTWVFAIAYRKARKAIAAFDEPVDAEPDLREAEPDCQPEHQFQSRRRQQAVGAALERLPLEQRTVVQLTYFHEMAYADIAEIMGCPLNTVKTRMFHARRRLAALLVNRLEEES*