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H2-18-all-fractions_k255_1100657_5

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(2837..3058)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDD3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 73.0
  • Bit_score: 136
  • Evalue 8.30e-30
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 73.0
  • Bit_score: 136
  • Evalue 1.20e-29
rpoE; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 72.0
  • Bit_score: 124
  • Evalue 7.10e-27

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Taxonomy

Massilia timonae → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
AAGCAGATCGCGTACACGGTCAATGCCGCGATGGAAGCGCTACCGCTGGAACTGCGGACAGCCATTGTCCTTCGCGAGATTGAAGGATTGAGCTACGAGGAAATCTCCGAAGTGATGGCGTGCCCGATTGGTACAGTTCGCAGCAGGATATTCCGGGCCCGCGAAGTCATTGCCGACAAATTGCGGCCTCTGCTGGATTTGCCGGTTGACAAACGTCGGTAG
PROTEIN sequence
Length: 74
KQIAYTVNAAMEALPLELRTAIVLREIEGLSYEEISEVMACPIGTVRSRIFRAREVIADKLRPLLDLPVDKRR*