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H2-18-all-fractions_k255_1378442_1

Organism: H2-18-all-fractions_metab_conc_87

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Location: comp(97..972)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JGN3_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 290.0
  • Bit_score: 392
  • Evalue 3.30e-106
sigma-24 similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 290.0
  • Bit_score: 392
  • Evalue 9.40e-107
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABD09559.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 290.0
  • Bit_score: 392
  • Evalue 4.70e-106

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Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
GTGGAAGATCGTGACTGGCTGGCGGAGCAGTTCGAGCGGCAGCGACCCCAGCTGCGGGCCGTCGCCTACCGGATGCTCGGGTCGATGAGCGAGGCCGACGACGCCGTCCAGGAGTCGTGGCTGCGGCTCAACCGGTCCGACACCGAGGCGGTGTCGAACCTGGGCGGCTGGCTGACGACCGTGGTCGGCCGCGTCTGCCTCGACATGCTCCGCGCCCGGCGGGCGCGCCGCGAGGACTACGTGGGCAGCTGGCTGCCGGAGCCGGTTGTGCGGGCCGAGACCGCCGACGACCCCGAGCAGGAGGCGCTGATGGCCGACTCGGTGGGGCTGGCGCTGCTCGTCGTCCTCGAGACGCTCACGCCGGCGGAGCGGCTCGCGTTCGTCCTGCACGACATGTTCGCCGTCCCCTTCGAGGAGATCGCGCCCGTGGTGGACCGCACGCCCGAGGCCGCGCGCCAGCTCGCGAGCCGCGCCCGCCGGCGGGTGCGTGGAGCGCCGGAGCCGGACCCGGACATCGAGCGCCAGCGAGAGCTGGTCGAGGCCTTCCTCGCCGCTTCGCGGGCGGGCGACTTCGACTCCCTGGTGGCCGTCCTCGACCCGGACGTGGTCTTCAACGCCGACACGGGCGGGGTCCCGCCGCGGGCCCGCGAACCCGTGGTCGGGGCCGAGGCCGTCGCCGAGCAGGTGCTCCGCCGCGGCAGCCGCTTTGCGAGCTACGCGCAGCACGCGATCGTCAACGGCGGGGCGGGTCTGGTCGTGGAGCTCCAAGGGAGGCCGTTCGCGGTGCTCGGCTTCACGACCGCGGGCGGCCGCATCGTCGAGCTGGATCTCATCCTCGATCCGGCCAAGCTCGATCGCGTGTCGTTGAACCCCTAG
PROTEIN sequence
Length: 292
VEDRDWLAEQFERQRPQLRAVAYRMLGSMSEADDAVQESWLRLNRSDTEAVSNLGGWLTTVVGRVCLDMLRARRARREDYVGSWLPEPVVRAETADDPEQEALMADSVGLALLVVLETLTPAERLAFVLHDMFAVPFEEIAPVVDRTPEAARQLASRARRRVRGAPEPDPDIERQRELVEAFLAASRAGDFDSLVAVLDPDVVFNADTGGVPPRAREPVVGAEAVAEQVLRRGSRFASYAQHAIVNGGAGLVVELQGRPFAVLGFTTAGGRIVELDLILDPAKLDRVSLNP*