ggKbase home page

H2-18-all-fractions_k255_4729444_4

Organism: H2-18-all-fractions_metab_conc_87

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Location: 1806..2915

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629878 bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 377.0
  • Bit_score: 431
  • Evalue 8.20e-118
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 375.0
  • Bit_score: 419
  • Evalue 5.40e-115
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 368.0
  • Bit_score: 460
  • Evalue 1.40e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGGCGCTCGAGCGCTGGCCGGAGCAGGGGTTGCCCGACAACCCCGGTGCCTGGATCACCACGACGGCCCGCAACAAGGCGATCGACCGTGTTCGACGAGAGGCGCGACTCCGCGAGAAGAAGGAGGTCCTGCGCGACCTCGAGGAGCTGGGTGGCGAGGACGGCGAGGACGTGAGCGCGCTCCCGGACGACCGCCTGCGGCTGTTCTTCACCTGCTGCCACCCGGCGTTGGCGCCGGAGGCGCGGGTGGCGCTCACGCTGCGGACGCTGGGCGGGCTGTCGACGCCCGAGATCGCCCGGGCGTTCCTCGTCGGCGAGACCGCCATGCAGCAGCGGCTCGTTCGCGCCAAGCGGAAGATCCACGCGGCCAACATCGCCTACGAGGTGCCGCCGGACGAGGCGCTGCCCGACCGCCTGCCCTCGGTGCTCGCGGCCCTCTACCTCGTCTTCAACGAGGGCTACCTCGCCACCTCGGACGCCGCGCTGGTGCGGCGCGAGCTGTGCGCCGAGGCGATCCGGCTCGGCCGGCTGCTCGCCACGCTGATGCCGGACGAGCCCGAGGCGCTGGGCCTGGTGGCGCTGATGCTCCTCCACGACTCCCGGCGCGATGCGCGGACCGGGCCGGCCGGCGAACTCGTGCTGCTCGAGGATCAGGATCGCTCGAGTTGGGACCGCGCCGAGATCCGCGAGGGGCTCGGCGTGGTGGAGCGGGCCCTGCGGCACGGCGTCGTCGGGCCGTACGCCCTCCAGGCCGCCATCGCCGCCGAGCACGCCCGTGCGTCCGAGGCCGCGGAGACGAACTGGCAGGCGATCGCCGCGCTCTACGAAGCGCTCGTTCGGGTCTCGCGTTCACCGGTCGTGGAGCTCAACCGGGCGGTGGCGGTGGCGATGGCGGATGGGCCCGAGCGGGGGCTCGAGCTCGTCGACCAGCTCGCGGGTGACCTGGGGGGCTACCACCTCTTCCACTCCGCCCGGGCCGATCTGCTCCGCCGGATGGAGCGCTCGGACGAGGCGGCGGCCGCCTACAGGAGGGCGGCCGAGCTTGCCACGAACCCCGCGGAGCGCGCCTTCCTCGAGCGTCGCCTGCGGGAGACCGCGACTAGCGCCTGA
PROTEIN sequence
Length: 370
MALERWPEQGLPDNPGAWITTTARNKAIDRVRREARLREKKEVLRDLEELGGEDGEDVSALPDDRLRLFFTCCHPALAPEARVALTLRTLGGLSTPEIARAFLVGETAMQQRLVRAKRKIHAANIAYEVPPDEALPDRLPSVLAALYLVFNEGYLATSDAALVRRELCAEAIRLGRLLATLMPDEPEALGLVALMLLHDSRRDARTGPAGELVLLEDQDRSSWDRAEIREGLGVVERALRHGVVGPYALQAAIAAEHARASEAAETNWQAIAALYEALVRVSRSPVVELNRAVAVAMADGPERGLELVDQLAGDLGGYHLFHSARADLLRRMERSDEAAAAYRRAAELATNPAERAFLERRLRETATSA*