ggKbase home page

H2-18-all-fractions_k255_5425291_5

Organism: H2-18-all-fractions_metab_conc_87

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Location: comp(2984..3868)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, polymerase domain-containing protein n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EXG4_STRRM similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 290.0
  • Bit_score: 269
  • Evalue 3.30e-69
ATP-dependent DNA ligase {ECO:0000313|EMBL:KDS85000.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 291.0
  • Bit_score: 272
  • Evalue 4.20e-70
DNA polymerase LigD, polymerase domain protein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 283.0
  • Bit_score: 268
  • Evalue 1.60e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces fradiae → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGACGGACGAGCTCAAGATCGGCCGCCGGACGGTCCGGGTGACCCACCAGGAGAAGGTCCTGTTCCCGGAGGCGGGAGTCACGAAGCTCGACCTGGCCCGCCACTACGAGCGCGTGGCGCCGGTGATGCTGCCCTACGTCTCGGACCGGCCGCTGGCGCTCCAGGCGTTCCCCAACGGGGTCGGCGAGCACGGGTTCTTCATGAAGGCCGTGCCGGACTACTTCCCCGACTGGGTGAAGCGGAAGACCCTCCCCAAGCGGGGCGGGAAGATCACGCACGCCCTGGCCGATGACGCGCCATCGCTGGCGTACCTCGCGGGACAGAACGTCGTGGCCATCCATGGCTGGCTGTCGAAGGCCGACGAGCCCCGCAAGCCCCACATCCTGATCATCGACTTCGATCCCTCCAAGGAGGGCGGCTTCCCCGACGTGCGCGCAGCCGCCCGCGACGCCGGCGAGCGGCTGCGCGACGCGGGGCTCAGCACCTACGCGATGACCACCGGCTCGCGCGGCATCCACGTGGTCTGCCCGCTGCGGCGAGGGCCGGGCTTCACCGACGTGCACCGGTTCGCCAAGTCGCTCGCCCAGCAGATGGTCGAGGACAACCCGAAGAAGCTGACCCTCGAGTACCTGAAGGCCAACCGCGAGGACAAGATCTACGTCGACGTGAACCGCAACGCCTACGCGCAGCACGCGGTCGTGCCCTACTCGACGCGGGCGAAGCCCAAGGCGCCGGTGGCGGTGCCGATCCACTGGGAAGAGCTCTCCGACGGCAAGCTGCGAGCCGACCGTTGGACGGTCAAGACGATCGGCAAGCGCGTCGAGTCGGAGGGCGATCCGTGGAAGGGAATGGCCCGCCGCGCCAGGGCGCTACCGAAGCGCTAG
PROTEIN sequence
Length: 295
VTDELKIGRRTVRVTHQEKVLFPEAGVTKLDLARHYERVAPVMLPYVSDRPLALQAFPNGVGEHGFFMKAVPDYFPDWVKRKTLPKRGGKITHALADDAPSLAYLAGQNVVAIHGWLSKADEPRKPHILIIDFDPSKEGGFPDVRAAARDAGERLRDAGLSTYAMTTGSRGIHVVCPLRRGPGFTDVHRFAKSLAQQMVEDNPKKLTLEYLKANREDKIYVDVNRNAYAQHAVVPYSTRAKPKAPVAVPIHWEELSDGKLRADRWTVKTIGKRVESEGDPWKGMARRARALPKR*