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H2-18-all-fractions_k255_5613789_5

Organism: H2-18-all-fractions_metab_conc_87

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Location: comp(3002..3487)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X9D0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 168.0
  • Bit_score: 90
  • Evalue 8.80e-16
RNA polymerase sigma factor SigM similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 174.0
  • Bit_score: 84
  • Evalue 1.80e-14
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 156.0
  • Bit_score: 165
  • Evalue 3.90e-38

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGGGTTGCATGAAGTCGGAGGCCAGCCTCGAGGAGATCGAACGGGTCTACCGCGACCGGCTGCCGGACTTCCGCCGCGTCGCGGCGGCGATCGCCGGCGACCGTGAGCTCGCTCGCGACGCCGTTCAGGAGGCGTTCGCCCTCGCCGTTCGCCGCCGGGCCACGTTTCGCGGCGAGGGATCGCTCGAGGCCTGGCTGTGGCGCATCGTCGTCAACACGGCACGTAGCCAGGCGCGGAGGCTGCGACCACCCGCGTCGCCGCTTGCGACTTCCAACGGGCACCACGACGCGGGGGCGGACCGCGTCCGAGCGGCGCTGGCCCTGCTGCCCGTGCGGCAGCGCCTCATCGTGTTCCTGCACTACTACGCGGACCTGGACTACGCCACGATCGCGGACGCGCTCGAAATCAGCAGCGGCACGGTCGGCGCGACGCTGCATTCCGCCCGGACGGCGATGCGAGACCTACTGGAGGAGATGCCGACATGA
PROTEIN sequence
Length: 162
MGCMKSEASLEEIERVYRDRLPDFRRVAAAIAGDRELARDAVQEAFALAVRRRATFRGEGSLEAWLWRIVVNTARSQARRLRPPASPLATSNGHHDAGADRVRAALALLPVRQRLIVFLHYYADLDYATIADALEISSGTVGATLHSARTAMRDLLEEMPT*