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H2-18-all-fractions_metab_conc_87

wsip-metawrap-drep-bins_Actinobacteria_71_5
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 4.79 Longest contig: 28.34 Kbp Bin length: 3.64 Mbp GC content: 71.16 %
Contigs count: 689 Features count: 4330 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Displaying items 451-500 of 689 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-18-all-fractions_k255_2669295
Class: Actinobacteria (50%)
4 3629 bp 70.85 3.22 99.78
H2-18-all-fractions_k255_5123262
Phylum: Proteobacteria (50%)
4 4218 bp 72.26 1.64 98.08
H2-18-all-fractions_k255_2680750
Species: Conexibacter woesei (100%)
4 2204 bp 71.37 4.15 100.45
H2-18-all-fractions_k255_2734083
Domain: Bacteria (75%)
4 3141 bp 68.61 7.69 95.70
H2-18-all-fractions_k255_2737712
Phylum: Actinobacteria (50%)
4 2724 bp 70.04 2.31 90.42
H2-18-all-fractions_k255_2801860
Species: Conexibacter woesei (75%)
4 2499 bp 71.99 2.58 100.60
H2-18-all-fractions_k255_5206846
Domain: Bacteria (50%)
4 3354 bp 70.87 2.82 95.80
H2-18-all-fractions_k255_2802108
Domain: Bacteria (50%)
4 3118 bp 70.78 3.46 94.39
H2-18-all-fractions_k255_689274
Order: Corynebacteriales (50%)
4 3481 bp 72.48 3.06 95.83
H2-18-all-fractions_k255_2837283
Species: Patulibacter medicamentivorans (50%)
4 2674 bp 74.64 3.81 82.01
H2-18-all-fractions_k255_2839375
Species: Conexibacter woesei (50%)
4 4133 bp 69.76 4.36 94.87
H2-18-all-fractions_k255_2858787
Species: Conexibacter woesei (50%)
4 2371 bp 72.42 3.35 97.55
H2-18-all-fractions_k255_784451
Species: Conexibacter woesei (75%)
4 2750 bp 71.38 3.71 93.38
H2-18-all-fractions_k255_2974598
Phylum: Actinobacteria (50%)
4 5102 bp 70.44 4.79 97.14
H2-18-all-fractions_k255_5343339 4 2413 bp 75.59 3.61 94.12
H2-18-all-fractions_k255_833840
Species: Patulibacter medicamentivorans (50%)
4 3386 bp 70.79 3.63 101.09
H2-18-all-fractions_k255_3017668
Species: Conexibacter woesei (50%)
4 2751 bp 70.08 5.94 94.33
H2-18-all-fractions_k255_3020772
Species: Conexibacter woesei (50%)
4 2540 bp 71.46 4.61 97.56
H2-18-all-fractions_k255_3058761
Species: Rubrobacter xylanophilus (50%)
4 3931 bp 71.23 3.47 92.65
H2-18-all-fractions_k255_5427824
Species: Conexibacter woesei (75%)
4 3008 bp 70.98 5.83 93.05
H2-18-all-fractions_k255_5467838
Species: Conexibacter woesei (50%)
4 2530 bp 74.62 3.74 92.13
H2-18-all-fractions_k255_5468736
Species: Conexibacter woesei (75%)
4 3356 bp 71.99 4.34 99.23
H2-18-all-fractions_k255_956997
Phylum: Actinobacteria (50%)
4 1787 bp 73.14 4.36 102.74
H2-18-all-fractions_k255_3154292
Order: Solirubrobacterales (50%)
4 2818 bp 74.27 4.21 99.01
H2-18-all-fractions_k255_966865
Phylum: Actinobacteria (50%)
4 2433 bp 70.24 4.56 100.12
H2-18-all-fractions_k255_5529720
Species: Conexibacter woesei (100%)
4 2342 bp 72.76 2.24 100.43
H2-18-all-fractions_k255_966923
Species: Conexibacter woesei (50%)
4 1969 bp 73.34 2.51 91.72
H2-18-all-fractions_k255_5538783
Species: Rubrobacter xylanophilus (50%)
4 3468 bp 71.68 2.94 97.40
H2-18-all-fractions_k255_978085
Class: Actinobacteria (50%)
4 3089 bp 70.67 4.90 93.43
H2-18-all-fractions_k255_5563084
Genus: Bacillus (50%)
4 3999 bp 71.82 3.23 100.15
H2-18-all-fractions_k255_1031493
Domain: Bacteria (50%)
4 2967 bp 71.18 3.99 98.28
H2-18-all-fractions_k255_3216977
Domain: Bacteria (75%)
4 1904 bp 71.85 3.31 91.54
H2-18-all-fractions_k255_5593400
Order: Solirubrobacterales (50%)
4 3544 bp 71.67 2.67 93.12
H2-18-all-fractions_k255_1050095
Species: Conexibacter woesei (50%)
4 2630 bp 72.66 2.85 99.35
H2-18-all-fractions_k255_5597644
Species: Cryptosporangium arvum (50%)
4 4707 bp 71.28 3.66 97.32
H2-18-all-fractions_k255_5623287
Species: Conexibacter woesei (75%)
4 2679 bp 69.35 2.52 93.06
H2-18-all-fractions_k255_3266328
Species: Conexibacter woesei (50%)
4 5685 bp 71.52 5.96 98.10
H2-18-all-fractions_k255_1092333
Species: Conexibacter woesei (50%)
4 3896 bp 72.64 4.27 97.25
H2-18-all-fractions_k255_3293945
Order: Solirubrobacterales (50%)
4 3400 bp 73.24 5.38 98.38
H2-18-all-fractions_k255_5698067
Order: Solirubrobacterales (50%)
4 3314 bp 68.01 4.66 86.18
H2-18-all-fractions_k255_1184146
Species: Conexibacter woesei (50%)
4 1778 bp 66.93 20.67 99.55
H2-18-all-fractions_k255_3388549
Domain: Bacteria (50%)
4 3059 bp 71.59 2.01 96.01
H2-18-all-fractions_k255_3390018
Species: Conexibacter woesei (75%)
4 3033 bp 74.94 3.86 98.81
H2-18-all-fractions_k255_3411425
Order: Solirubrobacterales (50%)
4 4223 bp 71.75 4.16 99.88
H2-18-all-fractions_k255_5826887
Genus: Streptomyces (50%)
4 1568 bp 71.88 3.92 86.86
H2-18-all-fractions_k255_1237528
Domain: Bacteria (50%)
4 2687 bp 73.91 4.75 78.04
H2-18-all-fractions_k255_1262048
Class: Deltaproteobacteria (50%)
4 2887 bp 71.74 3.17 93.83
H2-18-all-fractions_k255_1271678
Species: Conexibacter woesei (50%)
4 3139 bp 72.89 3.54 81.71
H2-18-all-fractions_k255_3499441
Phylum: Actinobacteria (50%)
4 2070 bp 70.82 2.32 77.68
H2-18-all-fractions_k255_5856994
Class: Clostridia (50%)
4 2768 bp 75.25 3.68 100.36
Displaying items 451-500 of 689 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.