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H2-18-all-fractions_metab_conc_87

wsip-metawrap-drep-bins_Actinobacteria_71_5
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 4.79 Longest contig: 28.34 Kbp Bin length: 3.64 Mbp GC content: 71.16 %
Contigs count: 689 Features count: 4330 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Displaying items 1-50 of 689 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-18-all-fractions_k255_4039820
Species: RBG_16_Chloroflexi_50_9_curated (100%)
1 2024 bp 71.39 3.56 99.90
H2-18-all-fractions_k255_4655772
Species: Streptomyces iranensis (100%)
1 2028 bp 73.22 3.33 99.85
H2-18-all-fractions_k255_413425
Species: Conexibacter woesei (100%)
1 2238 bp 70.55 4.29 99.87
H2-18-all-fractions_k255_2453986
Species: Conexibacter woesei (100%)
1 1547 bp 70.46 34.52 99.87
H2-18-all-fractions_k255_563507
Species: Conexibacter woesei (100%)
1 2068 bp 69.58 5.88 99.95
H2-18-all-fractions_k255_3041196 1 1568 bp 74.74 4.11 66.01
H2-18-all-fractions_k255_1551101
Species: RBG_16_Actinobacteria_68_12_curated (100%)
1 2157 bp 75.48 2.85 100.00
H2-18-all-fractions_k255_1693211
Species: Conexibacter woesei (50%)
2 2519 bp 71.18 8.46 84.32
H2-18-all-fractions_k255_4393864
Species: CSP1_4_Chloroflexi (50%)
2 2755 bp 72.89 5.44 97.02
H2-18-all-fractions_k255_4506979
Species: Conexibacter woesei (50%)
2 2458 bp 72.50 2.93 97.76
H2-18-all-fractions_k255_4582735
Species: Conexibacter woesei (50%)
2 2329 bp 71.32 2.06 74.84
H2-18-all-fractions_k255_4611476
Species: Desulfitobacterium metallireducens (50%)
2 1987 bp 74.33 4.91 99.35
H2-18-all-fractions_k255_174988
Species: GWA2_Elusimicrobia_69_24_curated (50%)
2 1601 bp 70.71 4.87 98.94
H2-18-all-fractions_k255_2172533
Species: Conexibacter woesei (50%)
2 2397 bp 72.67 3.38 92.49
H2-18-all-fractions_k255_4684050
Species: Conexibacter woesei (50%)
2 2940 bp 74.69 2.96 101.43
H2-18-all-fractions_k255_329112
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 2725 bp 73.54 2.48 100.07
H2-18-all-fractions_k255_2341524
Species: Conexibacter woesei (50%)
2 2193 bp 72.50 3.69 96.31
H2-18-all-fractions_k255_2397759
Species: marine sediment metagenome (50%)
2 4272 bp 72.10 3.65 89.40
H2-18-all-fractions_k255_4858438
Species: Conexibacter woesei (100%)
2 2191 bp 67.09 4.72 100.09
H2-18-all-fractions_k255_395072
Species: Conexibacter woesei (50%)
2 1610 bp 68.88 2.80 100.25
H2-18-all-fractions_k255_406919
Species: Patulibacter medicamentivorans (50%)
2 1659 bp 69.08 6.51 100.00
H2-18-all-fractions_k255_2429446
Species: Conexibacter woesei (50%)
2 2755 bp 71.18 2.23 100.07
H2-18-all-fractions_k255_421915
Species: Sporocytophaga myxococcoides (50%)
2 2434 bp 72.10 2.71 99.59
H2-18-all-fractions_k255_440936
Species: Conexibacter woesei (100%)
2 2162 bp 67.16 5.76 95.61
H2-18-all-fractions_k255_4957104
Species: Conexibacter woesei (50%)
2 2459 bp 75.23 2.75 99.92
H2-18-all-fractions_k255_4979460
Species: Frankia sp. EuI1c (50%)
2 2360 bp 69.92 5.91 94.96
H2-18-all-fractions_k255_525690
Species: Conexibacter woesei (50%)
2 3127 bp 72.15 3.41 95.17
H2-18-all-fractions_k255_560789
Species: Conexibacter woesei (50%)
2 1718 bp 71.13 3.84 99.88
H2-18-all-fractions_k255_5032780
Species: Conexibacter woesei (100%)
2 2934 bp 69.19 5.62 98.06
H2-18-all-fractions_k255_2597372
Species: Conexibacter woesei (100%)
2 1787 bp 72.47 7.05 98.38
H2-18-all-fractions_k255_5120672
Species: Frankia sp. QA3 (50%)
2 2326 bp 69.26 4.45 94.02
H2-18-all-fractions_k255_2702973
Species: Conexibacter woesei (100%)
2 2645 bp 70.89 4.59 96.75
H2-18-all-fractions_k255_2709118
Species: Rubrobacter xylanophilus (100%)
2 3115 bp 70.69 4.57 98.33
H2-18-all-fractions_k255_667020
Species: Streptomyces rubellomurinus (50%)
2 1810 bp 70.94 2.82 98.62
H2-18-all-fractions_k255_2744035
Species: Lutibaculum baratangense (50%)
2 2334 bp 69.79 3.60 98.84
H2-18-all-fractions_k255_724748
Species: RBG_16_Armatimonadetes_58_9_curated (50%)
2 1595 bp 69.91 5.83 99.12
H2-18-all-fractions_k255_749799
Species: Megasphaera sp. BV3C16-1 (50%)
2 2794 bp 70.26 3.54 94.27
H2-18-all-fractions_k255_5366390
Species: Conexibacter woesei (100%)
2 4329 bp 73.85 3.64 100.07
H2-18-all-fractions_k255_938843
Species: Conexibacter woesei (50%)
2 3258 bp 68.94 24.36 99.63
H2-18-all-fractions_k255_5584745
Species: GWA2_Deltaproteobacteria_55_10_curated (50%)
2 1776 bp 71.96 4.22 99.32
H2-18-all-fractions_k255_1073252
Species: Sphaerobacter thermophilus (50%)
2 1731 bp 75.51 3.81 99.13
H2-18-all-fractions_k255_1185505
Species: Conexibacter woesei (50%)
2 2109 bp 67.52 5.90 84.35
H2-18-all-fractions_k255_5762260
Species: Xanthomonas sacchari (50%)
2 2119 bp 74.89 2.34 100.09
H2-18-all-fractions_k255_3379722
Species: Conexibacter woesei (100%)
2 1713 bp 72.10 5.08 100.00
H2-18-all-fractions_k255_5793357
Species: Conexibacter woesei (100%)
2 2607 bp 74.76 3.11 100.12
H2-18-all-fractions_k255_1315097
Species: RBG_16_RIF_CHLX_69_14_curated (50%)
2 2423 bp 75.77 3.16 100.16
H2-18-all-fractions_k255_1320700
Species: Patulibacter medicamentivorans (50%)
2 1705 bp 73.37 3.26 91.67
H2-18-all-fractions_k255_1371404
Species: marine sediment metagenome (100%)
2 1972 bp 69.78 4.34 100.10
H2-18-all-fractions_k255_1382038
Species: Conexibacter woesei (50%)
2 1890 bp 72.22 4.29 92.38
H2-18-all-fractions_k255_1403077
Species: Gordonia terrae (50%)
2 1847 bp 75.37 1.95 100.54
Displaying items 1-50 of 689 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.