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H2-18-all-fractions_metab_conc_87

wsip-metawrap-drep-bins_Actinobacteria_71_5
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 4.79 Longest contig: 28.34 Kbp Bin length: 3.64 Mbp GC content: 71.16 %
Contigs count: 689 Features count: 4330 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Displaying items 51-100 of 689 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-18-all-fractions_k255_4564683
Phylum: Actinobacteria (75%)
12 10204 bp 70.58 4.20 95.73
H2-18-all-fractions_k255_1995272
Domain: Bacteria (66.67%)
12 10238 bp 69.97 5.36 90.72
H2-18-all-fractions_k255_2146639
Species: Conexibacter woesei (50%)
12 8822 bp 71.29 4.05 96.81
H2-18-all-fractions_k255_2186068
Phylum: Actinobacteria (50%)
12 9863 bp 70.31 4.76 95.81
H2-18-all-fractions_k255_355934
Domain: Bacteria (58.33%)
12 8030 bp 72.91 4.39 96.84
H2-18-all-fractions_k255_4885047
Phylum: Actinobacteria (58.33%)
12 8777 bp 69.18 7.40 89.31
H2-18-all-fractions_k255_2523423
Order: Solirubrobacterales (50%)
12 8470 bp 72.86 4.13 94.99
H2-18-all-fractions_k255_2702373
Species: Conexibacter woesei (66.67%)
12 9577 bp 71.95 4.37 95.48
H2-18-all-fractions_k255_2870631
Domain: Bacteria (58.33%)
12 13189 bp 70.83 3.68 99.61
H2-18-all-fractions_k255_1147963
Species: Conexibacter woesei (58.33%)
12 9239 bp 70.31 9.12 98.06
H2-18-all-fractions_k255_3399836
Species: Conexibacter woesei (58.33%)
12 8784 bp 69.90 7.46 94.30
H2-18-all-fractions_k255_1248898
Phylum: Actinobacteria (58.33%)
12 10761 bp 69.58 3.90 99.16
H2-18-all-fractions_k255_5840032
Phylum: Actinobacteria (66.67%)
12 13183 bp 69.13 2.40 84.31
H2-18-all-fractions_k255_5860171
Phylum: Actinobacteria (58.33%)
12 13722 bp 69.55 3.73 94.69
H2-18-all-fractions_k255_1762963
Phylum: Actinobacteria (54.55%)
11 10304 bp 73.43 4.38 99.51
H2-18-all-fractions_k255_1792132
Species: Conexibacter woesei (54.55%)
11 9010 bp 71.22 4.56 96.13
H2-18-all-fractions_k255_4272434
Domain: Bacteria (72.73%)
11 8539 bp 73.22 3.88 99.36
H2-18-all-fractions_k255_1826981
Domain: Bacteria (90.91%)
11 11134 bp 72.37 3.56 97.46
H2-18-all-fractions_k255_1896389 11 7145 bp 69.62 3.55 81.79
H2-18-all-fractions_k255_4775350
Phylum: Actinobacteria (54.55%)
11 6675 bp 72.16 4.85 94.34
H2-18-all-fractions_k255_350419
Phylum: Actinobacteria (63.64%)
11 9259 bp 73.37 4.15 100.31
H2-18-all-fractions_k255_2388601
Species: Conexibacter woesei (54.55%)
11 7243 bp 70.72 4.02 91.41
H2-18-all-fractions_k255_2911770
Phylum: Actinobacteria (72.73%)
11 10911 bp 71.75 3.59 98.90
H2-18-all-fractions_k255_774395
Species: Conexibacter woesei (54.55%)
11 8059 bp 70.75 3.69 94.66
H2-18-all-fractions_k255_895794
Domain: Bacteria (81.82%)
11 9016 bp 70.16 4.26 95.06
H2-18-all-fractions_k255_5405795
Domain: Bacteria (63.64%)
11 10623 bp 70.98 3.16 95.20
H2-18-all-fractions_k255_3239372
Domain: Bacteria (72.73%)
11 9231 bp 71.27 4.18 92.79
H2-18-all-fractions_k255_3281877
Species: Conexibacter woesei (54.55%)
11 6905 bp 72.27 3.98 94.50
H2-18-all-fractions_k255_1130646
Species: Conexibacter woesei (63.64%)
11 9940 bp 72.77 5.66 98.48
H2-18-all-fractions_k255_5698816
Order: Solirubrobacterales (54.55%)
11 9142 bp 69.22 5.48 94.57
H2-18-all-fractions_k255_3344207
Phylum: Actinobacteria (90.91%)
11 13923 bp 70.42 3.59 96.12
H2-18-all-fractions_k255_5837157
Species: Conexibacter woesei (54.55%)
11 9659 bp 72.00 6.32 97.71
H2-18-all-fractions_k255_5939513
Species: Conexibacter woesei (72.73%)
11 10773 bp 71.00 5.75 95.93
H2-18-all-fractions_k255_3623442
Phylum: Actinobacteria (72.73%)
11 15230 bp 70.87 6.64 95.28
H2-18-all-fractions_k255_1426588
Class: Actinobacteria (63.64%)
11 9324 bp 69.73 5.08 90.57
H2-18-all-fractions_k255_3919425
Species: Conexibacter woesei (63.64%)
11 8317 bp 71.36 3.91 84.33
H2-18-all-fractions_k255_4018847
Phylum: Actinobacteria (72.73%)
11 10698 bp 70.85 4.09 89.46
H2-18-all-fractions_k255_4221348
Domain: Bacteria (80%)
10 6340 bp 70.87 3.76 97.29
H2-18-all-fractions_k255_1805816
Phylum: Actinobacteria (70%)
10 8178 bp 72.18 3.98 100.29
H2-18-all-fractions_k255_2119236
Domain: Bacteria (90%)
10 11455 bp 70.48 5.19 92.47
H2-18-all-fractions_k255_2206921
Phylum: Actinobacteria (80%)
10 10690 bp 72.64 3.40 94.35
H2-18-all-fractions_k255_5013048
Phylum: Actinobacteria (70%)
10 9533 bp 70.88 4.14 95.76
H2-18-all-fractions_k255_2641751
Species: Conexibacter woesei (80%)
10 8690 bp 73.18 4.06 91.52
H2-18-all-fractions_k255_658224
Class: Actinobacteria (60%)
10 9649 bp 67.85 3.11 82.73
H2-18-all-fractions_k255_2950394
Domain: Bacteria (90%)
10 13403 bp 68.75 3.89 97.59
H2-18-all-fractions_k255_3235013
Phylum: Actinobacteria (60%)
10 7847 bp 72.96 3.73 97.07
H2-18-all-fractions_k255_3264648
Species: Conexibacter woesei (60%)
10 9898 bp 71.58 4.96 97.87
H2-18-all-fractions_k255_1090692
Class: Actinobacteria (50%)
10 5209 bp 70.65 2.59 95.78
H2-18-all-fractions_k255_5743458
Order: Solirubrobacterales (50%)
10 9705 bp 70.69 3.89 96.41
H2-18-all-fractions_k255_1233974
Species: Conexibacter woesei (70%)
10 9573 bp 71.59 5.20 90.10
Displaying items 51-100 of 689 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.