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H2-18-all-fractions_metab_conc_87

wsip-metawrap-drep-bins_Actinobacteria_71_5
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 4.79 Longest contig: 28.34 Kbp Bin length: 3.64 Mbp GC content: 71.16 %
Contigs count: 689 Features count: 4330 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Displaying items 101-150 of 689 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-18-all-fractions_k255_5187663
Order: Solirubrobacterales (50%)
6 2345 bp 72.11 4.03 99.66
H2-18-all-fractions_k255_717254
Species: Conexibacter woesei (66.67%)
9 4600 bp 68.39 5.71 99.65
H2-18-all-fractions_k255_938843
Species: Conexibacter woesei (50%)
2 3258 bp 68.94 24.36 99.63
H2-18-all-fractions_k255_2870631
Domain: Bacteria (58.33%)
12 13189 bp 70.83 3.68 99.61
H2-18-all-fractions_k255_421915
Species: Sporocytophaga myxococcoides (50%)
2 2434 bp 72.10 2.71 99.59
H2-18-all-fractions_k255_4674374
Species: Conexibacter woesei (83.33%)
6 2889 bp 72.24 4.47 99.58
H2-18-all-fractions_k255_5492951
Species: Conexibacter woesei (66.67%)
3 3070 bp 73.22 4.40 99.58
H2-18-all-fractions_k255_3702317
Species: Conexibacter woesei (66.67%)
3 2094 bp 72.30 5.37 99.57
H2-18-all-fractions_k255_2570788
Domain: Bacteria (80%)
5 2456 bp 71.38 3.60 99.55
H2-18-all-fractions_k255_1184146
Species: Conexibacter woesei (50%)
4 1778 bp 66.93 20.67 99.55
H2-18-all-fractions_k255_4575669
Class: Actinobacteria (66.67%)
6 3472 bp 73.24 2.72 99.54
H2-18-all-fractions_k255_4627685
Species: Conexibacter woesei (100%)
3 2577 bp 68.53 29.39 99.53
H2-18-all-fractions_k255_1762963
Phylum: Actinobacteria (54.55%)
11 10304 bp 73.43 4.38 99.51
H2-18-all-fractions_k255_175651
Species: Conexibacter woesei (100%)
6 5295 bp 73.64 3.57 99.49
H2-18-all-fractions_k255_4059242
Order: Solirubrobacterales (62.5%)
8 6951 bp 72.59 3.69 99.48
H2-18-all-fractions_k255_5068080
Species: Conexibacter woesei (71.43%)
7 7133 bp 70.56 8.79 99.47
H2-18-all-fractions_k255_3945349
Order: Solirubrobacterales (50%)
4 2323 bp 70.56 6.33 99.44
H2-18-all-fractions_k255_4731276
Class: Deltaproteobacteria (50%)
6 3112 bp 71.69 3.47 99.39
H2-18-all-fractions_k255_583470
Species: Conexibacter woesei (80%)
5 2928 bp 70.53 2.25 99.39
H2-18-all-fractions_k255_5403187
Phylum: Actinobacteria (66.67%)
6 4320 bp 69.38 22.01 99.38
H2-18-all-fractions_k255_1087907
Species: Conexibacter woesei (66.67%)
3 1899 bp 69.09 5.13 99.37
H2-18-all-fractions_k255_4272434
Domain: Bacteria (72.73%)
11 8539 bp 73.22 3.88 99.36
H2-18-all-fractions_k255_1050095
Species: Conexibacter woesei (50%)
4 2630 bp 72.66 2.85 99.35
H2-18-all-fractions_k255_6009966
Species: Conexibacter woesei (50%)
4 3068 bp 70.44 3.52 99.35
H2-18-all-fractions_k255_4611476
Species: Desulfitobacterium metallireducens (50%)
2 1987 bp 74.33 4.91 99.35
H2-18-all-fractions_k255_5584745
Species: GWA2_Deltaproteobacteria_55_10_curated (50%)
2 1776 bp 71.96 4.22 99.32
H2-18-all-fractions_k255_5273212
Domain: Bacteria (50%)
6 6048 bp 73.81 4.04 99.31
H2-18-all-fractions_k255_367023
Phylum: Actinobacteria (50%)
4 3052 bp 71.76 3.83 99.28
H2-18-all-fractions_k255_5602464
Domain: Bacteria (100%)
5 4418 bp 72.66 3.67 99.28
H2-18-all-fractions_k255_2078395
Genus: Saccharomonospora (66.67%)
3 3373 bp 72.25 3.47 99.26
H2-18-all-fractions_k255_5843719
Species: Conexibacter woesei (50%)
6 4036 bp 73.93 4.01 99.23
H2-18-all-fractions_k255_5468736
Species: Conexibacter woesei (75%)
4 3356 bp 71.99 4.34 99.23
H2-18-all-fractions_k255_2084584
Species: Conexibacter woesei (80%)
5 4372 bp 72.19 6.04 99.22
H2-18-all-fractions_k255_1248898
Phylum: Actinobacteria (58.33%)
12 10761 bp 69.58 3.90 99.16
H2-18-all-fractions_k255_5147184
Species: Conexibacter woesei (85.71%)
14 11103 bp 71.30 4.63 99.16
H2-18-all-fractions_k255_1073252
Species: Sphaerobacter thermophilus (50%)
2 1731 bp 75.51 3.81 99.13
H2-18-all-fractions_k255_724748
Species: RBG_16_Armatimonadetes_58_9_curated (50%)
2 1595 bp 69.91 5.83 99.12
H2-18-all-fractions_k255_962487
Species: Conexibacter woesei (80%)
5 2043 bp 70.48 3.82 99.12
H2-18-all-fractions_k255_4228697
Species: Conexibacter woesei (66.67%)
3 2785 bp 70.92 5.28 99.10
H2-18-all-fractions_k255_1066766
Species: Conexibacter woesei (83.33%)
6 5380 bp 71.43 4.29 99.03
H2-18-all-fractions_k255_3002280
Species: Conexibacter woesei (57.14%)
7 5923 bp 70.45 4.10 99.02
H2-18-all-fractions_k255_3154292
Order: Solirubrobacterales (50%)
4 2818 bp 74.27 4.21 99.01
H2-18-all-fractions_k255_4048772
Genus: Nocardia (60%)
5 3197 bp 71.91 4.74 99.00
H2-18-all-fractions_k255_5779624
Species: Conexibacter woesei (57.14%)
7 6396 bp 71.92 5.14 98.97
H2-18-all-fractions_k255_4509944
Species: Conexibacter woesei (80%)
5 3389 bp 71.44 11.77 98.97
H2-18-all-fractions_k255_3662054
Domain: Bacteria (100%)
3 3405 bp 72.80 4.98 98.94
H2-18-all-fractions_k255_174988
Species: GWA2_Elusimicrobia_69_24_curated (50%)
2 1601 bp 70.71 4.87 98.94
H2-18-all-fractions_k255_1329016
Species: Conexibacter woesei (50%)
4 3100 bp 72.52 3.73 98.90
H2-18-all-fractions_k255_2911770
Phylum: Actinobacteria (72.73%)
11 10911 bp 71.75 3.59 98.90
H2-18-all-fractions_k255_5170771
Class: Actinobacteria (80%)
5 2767 bp 71.88 2.01 98.88
Displaying items 101-150 of 689 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.