ggKbase home page

H3-16-all-fractions_k255_5644465_4

Organism: H3-16-all-fractions_metab_conc_110

near complete RP 40 / 55 BSCG 42 / 51 MC: 1 ASCG 10 / 38
Location: comp(3830..5182)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 336.0
  • Bit_score: 443
  • Evalue 2.10e-121
transcription termination factor Rho n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746046 similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 467.0
  • Bit_score: 490
  • Evalue 1.40e-135
rho; transcriptional terminator Rho similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 450.0
  • Bit_score: 426
  • Evalue 5.40e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1353
ATGAGCGAAAGCGAATCTAAAACTGAAGAGGTGCGAGTCGAAGAGAAGTCCGCTGAGACAGCGGACGCTACAACACCGCCGTCGGCGAACCTGCCTGACACATTGGATATCAACGAGCTCCAGGCACTGCCCGCTGATGACATCGAGAAGCTTTGCCGCGATTTCGAGCTCCGCGTTTATCCGGGGCGCTCGCGCCACCATCTCATCCTCGATCTGGTTCGGGCGGCTCTCGGCCTTGGGGTTCGCGTAACGACCACGGGATTCTTCGACCCGGTCGCGGATGCGTTCGGCATCCTCCGGTGGCCTCGCCTCAACTTTCTTTCGGTGCCGGAGGAGGTTGGCGTGCCACGCGCGCTCATCCAGAAATTTAAGTTTCGTCCCGCCCAAAAAGTTCGCGGAACTGTGCGGCCGCCGCGCGACCGCGAGAAAATGGTCATGCTCGATGAAGTCCTCGAGGTGGAACGCATCCCCGTTGAACAGTGGACGGAGCCAACCGCTTTCGACAACCTCACGCCGCTTTATCCGCAGGGCCGGATCATGCTGGAAAATTCGAAAACGAACTCGATCAGCGCTCGCGCCGTCGATTTGTTGACGCCACTCGGCCGCGGCCAACGGGGTTTGATCGTGGCCGCGCCGCGAGTCGGGAAAACGATCCTGTTAAAAGAAATCGCGAAGGCGATTCGGGTGAATCACCCGGAGATTGTCCTGATCATTCTGCTGGTAGACGAGCGGCCGGAGGAAGTGACCGATCTGCAGCGCGAAGTGGATTGCGACGTTTACAATTCCACGTTCGACGAAAATTCACGGCGCCATGTCGAGGTCGCGGAGCTCGTCCTGGAGCGAGCGAAACGGCTGGTGGAGCAGCATAAGGACGTCGTCATATTGCTCGACAGCATTACGCGGCTAGCCCGCGGTTATAATTCACTCCAGCCCGGCAAAGGTAGGACCATGTCGGGTGGTGTTGAAGCGAAGGCGCTGCTCAAACCGAAGAAGTTTTTTGGCGCGGCCCGCAATTGCGAAGAGGGCGGAAGCCTGACGATTCTCGCGACCGCGCTGGTCGATACCGGGAGCAAAATGGACCAGGTGATTTTCGAGGAATTCAAGGGGACGGGCAACATGGAGCTGCACCTTGACCGCGCCCTCGTGGAGAAGCGGCTTTATCCGGCGATCCACTGTTTGCAATCGGCGACTCGGCGGGAGGACCTTCTTTATCACCCCGAGGAATGGGAGCGTGTCCAATTGTTGCGCAAAGCGATGGCGGCGCTGCCCCCGATCGAAGCAATGGAGAAGCTGATCGATAATTTGCAGGCGACGAAGACGAATGCCGAACTGCTTCTCAGTGGACTCAGATGA
PROTEIN sequence
Length: 451
MSESESKTEEVRVEEKSAETADATTPPSANLPDTLDINELQALPADDIEKLCRDFELRVYPGRSRHHLILDLVRAALGLGVRVTTTGFFDPVADAFGILRWPRLNFLSVPEEVGVPRALIQKFKFRPAQKVRGTVRPPRDREKMVMLDEVLEVERIPVEQWTEPTAFDNLTPLYPQGRIMLENSKTNSISARAVDLLTPLGRGQRGLIVAAPRVGKTILLKEIAKAIRVNHPEIVLIILLVDERPEEVTDLQREVDCDVYNSTFDENSRRHVEVAELVLERAKRLVEQHKDVVILLDSITRLARGYNSLQPGKGRTMSGGVEAKALLKPKKFFGAARNCEEGGSLTILATALVDTGSKMDQVIFEEFKGTGNMELHLDRALVEKRLYPAIHCLQSATRREDLLYHPEEWERVQLLRKAMAALPPIEAMEKLIDNLQATKTNAELLLSGLR*