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H3-16-all-fractions_k255_1852778_2

Organism: H3-16-all-fractions_metab_conc_110

near complete RP 40 / 55 BSCG 42 / 51 MC: 1 ASCG 10 / 38
Location: 901..1518

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2Q6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 174.0
  • Bit_score: 171
  • Evalue 6.50e-40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19496.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 174.0
  • Bit_score: 171
  • Evalue 9.20e-40
sigma70-ECF: RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 188.0
  • Bit_score: 137
  • Evalue 3.90e-30

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 618
ATGGCAATCTTTCCTGAAATCGTACCTCAACTCGACGGCGCAGACACTTCATTCATCTGCGACGAAGTCCTCATGCAAGAGATCACGCAGCGGCGCCAGCAGGCCCTGAAAGAACTCTATTCACGTTATTCCCGCTCGCTCCGCGCCCTCATCGGCAGCGTGGTCCACGAAGAATCGGAGGCGGACGACGTGCTCCAGGAATCATTTCTACAAATTTGGCGCGAGGCGCATCATTATTCGCCCAAAGCCGGCAAACCGCTCGGCTGGGTAATCACGATCGCGCGCCGGCGTGCAATCGATCGGGTGCGGCGGCGTGACAGCTATCGGCGAGCGAAGCAACGTTTCGAGGACGAAGTGAAACCGAAGACCCAGACGCCGCGGTTGGCCGGGATGGCAACCGAAGTTGCGCAGAGCGACCTTCGCCGTTTTCTCGGGCAGCAAATGCAAACCTTGCCAGCGGTGCAACGAGAAGCCGTCGAGCTGGCTTACTTTCGGGGATTGAGCCAGCGCGAAATTGCGGCGACGACAAATACCCCGCTCGGAACCGTAAAAACGCGGCTCCAACTGGGGTTGCGCAAACTGACCCAGTGCGTGCGTCCGTTACGGAGCAAGATTTAG
PROTEIN sequence
Length: 206
MAIFPEIVPQLDGADTSFICDEVLMQEITQRRQQALKELYSRYSRSLRALIGSVVHEESEADDVLQESFLQIWREAHHYSPKAGKPLGWVITIARRRAIDRVRRRDSYRRAKQRFEDEVKPKTQTPRLAGMATEVAQSDLRRFLGQQMQTLPAVQREAVELAYFRGLSQREIAATTNTPLGTVKTRLQLGLRKLTQCVRPLRSKI*