ggKbase home page

H3-16-all-fractions_k255_6787033_2

Organism: H3-16-all-fractions_metab_140

megabin RP 46 / 55 MC: 11 BSCG 46 / 51 MC: 12 ASCG 13 / 38 MC: 3
Location: comp(1033..1584)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 178.0
  • Bit_score: 150
  • Evalue 1.40e-33
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 181.0
  • Bit_score: 189
  • Evalue 5.80e-46
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89338.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 181.0
  • Bit_score: 189
  • Evalue 2.90e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
TTGGACACGAATCAGGCCAGCGACCGTGAGCTGCAAGAGCGCATCCGGGCGGGAGACGAGAGCGCTTTCGATGCGGTTTTCCGGGAGCACTACTCGCATCTCGTGCGCATGGCCGAATCAGTACTTCGGCAGCGTGCGACGGCAGAGGAAGTCGCGCAGGAAGTAATGCTGGAGCTTTGGCGGAGGCGAGAGGTTCTTCACATCGAGCAAAGCTTTCGCGCCTATCTTCTTCGCTCCACTCGCAACCGCGCTCTCAATCAGGTGCGTCACCAGCGGGTGGTTGACCGCGAGGCAGTTGTTTCCTCGATCGAGCCACGCAGTGCACCTTCGGCGGAAGACGAAATGCTGGGCACGGAGCTGGAAGTAGCGGTCCGCAACGCCATCGATGGCTTGCCCGAGAAGACCCGCGAAATCTTTCAGTTGAGCAGGTACCAGGGCCTGAAGTACGCCGAGATCGCGGCTACGCTCGAGATCTCCGTAAAAACGGTCGAGAAACGAATGGGGCAGGCGCTCGCCGAGCTGCGGAATCGCCTGAGCCAGTGGCTTCCGTAG
PROTEIN sequence
Length: 184
LDTNQASDRELQERIRAGDESAFDAVFREHYSHLVRMAESVLRQRATAEEVAQEVMLELWRRREVLHIEQSFRAYLLRSTRNRALNQVRHQRVVDREAVVSSIEPRSAPSAEDEMLGTELEVAVRNAIDGLPEKTREIFQLSRYQGLKYAEIAATLEISVKTVEKRMGQALAELRNRLSQWLP*