ggKbase home page

H3-16-all-fractions_k255_4565125_2

Organism: H3-16-all-fractions_metab_140

megabin RP 46 / 55 MC: 11 BSCG 46 / 51 MC: 12 ASCG 13 / 38 MC: 3
Location: comp(2021..2422)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZ35_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 133.0
  • Bit_score: 131
  • Evalue 3.70e-28
RNA-binding S4 domain protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 128.0
  • Bit_score: 133
  • Evalue 3.60e-29
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 124.0
  • Bit_score: 140
  • Evalue 1.10e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 402
ATGAGTTCAGATGAGGTTGGACGGGTCAGGCTCGACAAATGGCTCTGGGCCGCGCGTTTTTTCAAGACACGCGCGCTCGCTGCCACCGCAATCGAAAGCGGTAAAGTCGAGGTCAACGGCGAACGGGTGAAGCGAGCCAAACAGCTTCAGGTCGGGGACGAGCTCCGCATTCGCCTGGGGCCTTACCATCACATCGTCACGGTGCGGAAAGTGTCGGAGCATCGCGGACCTGCGCCGGTGGCGGCGGAGCTCTACGCGGAAAGTGAAGAGGGGAAGAAGGCGAGAGAGGCGATGCAGCTACAGGTCAAAGCCGCGCAATCCGTGCCGGGGTACGACCGGGGAAGACCGACAAAGAAAGATCGGCGCGATATCGAGAGAGTGAGGCGCCGGGATCTCGACTGA
PROTEIN sequence
Length: 134
MSSDEVGRVRLDKWLWAARFFKTRALAATAIESGKVEVNGERVKRAKQLQVGDELRIRLGPYHHIVTVRKVSEHRGPAPVAAELYAESEEGKKAREAMQLQVKAAQSVPGYDRGRPTKKDRRDIERVRRRDLD*