ggKbase home page

H3-16-all-fractions_k255_7612240_19

Organism: H3-16-all-fractions_metab_conc_32

partial RP 23 / 55 MC: 1 BSCG 29 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(13028..13993)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=14632234 bin=bin9_gal15 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 303.0
  • Bit_score: 294
  • Evalue 1.00e-76
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 322.0
  • Bit_score: 292
  • Evalue 8.60e-77
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 321.0
  • Bit_score: 375
  • Evalue 3.80e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 966
GTGGAACATCCGGCTCCCGAGCCTGCCCTTGACGCCGAACCTGCCGAGCCCGCCCTCGAGCTGCTCCCGGCGCTCGACGTCGTGGACGACGTGGAAGTCGAGGAGGAGCCGGACAACGCCTTCCTCACCGAGAACGAGCGGCTCCAGACCTCGGACCCGCTGAAGCTCTACGTCCGCCAGATCGGCGACGGCCGCCTGCTCACGCCGGCTGAGGAGCGCGAGCTCGCCCGGCGCAAGGACCTCGGGGACGAGGCCGCCAAGCGGCGGCTGATCGAGTGCAACCTGCGCCTCGTGATGTCGATCACGCGCAACTACACGAAGGCCGGCGTGCCGCTGCTGGATCTGATCCAGGAGGGGAACATGGGCCTCATCCGCGCGGTCGAGAAGTTCGACTACAAGATGGGCTACAAGCTCTCGACGTACGCGACGTGGTGGATCCGCCAGGCGGTCACGCGCGCGCTCGCCGACCAGGGCCGCACGATCCGGCTCCCGGTGCACGTCGCAGAGCAGGTGCGCCGCGTCATGCGCTCGCGCAGGCAGCTGACGCAGAAGCACAACCGCGACGCGACCGTCGAAGAGATCGCGAAGGACTCCGGCTTCACCGAGCAGCGCGTCCGCGAGCTGTTCGACCTCGTCGAGGATCCCGTCTCGCTCGAGACGCCGGTGGGGGACGGGGAGAGCATGGTCGCCGATCTGATCGAGGACGTGAAGTCGGAGTCGCCCGACGGCGCGCACGCGATCCACGCGCGCTCGGTCGAGCTCGGCGAGGCGCTCGAGCTGCTCAACCCGCGCATGAAGCATGTGCTGCTCCGCCGCTTCGGCCTGGACGGAAAGCCGCCCCAGACACTCGAAGAGGTCGGCAACGATCTCGGCATCACCCGCGAGCGCGTCCGCCAGCTCGAAACGCGCGCGTTGCGCGAGCTGCGCACCGTCGCTCCCGGCTTGCAGCTCTACCTACAGGCGTAG
PROTEIN sequence
Length: 322
VEHPAPEPALDAEPAEPALELLPALDVVDDVEVEEEPDNAFLTENERLQTSDPLKLYVRQIGDGRLLTPAEERELARRKDLGDEAAKRRLIECNLRLVMSITRNYTKAGVPLLDLIQEGNMGLIRAVEKFDYKMGYKLSTYATWWIRQAVTRALADQGRTIRLPVHVAEQVRRVMRSRRQLTQKHNRDATVEEIAKDSGFTEQRVRELFDLVEDPVSLETPVGDGESMVADLIEDVKSESPDGAHAIHARSVELGEALELLNPRMKHVLLRRFGLDGKPPQTLEEVGNDLGITRERVRQLETRALRELRTVAPGLQLYLQA*