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H3-16-all-fractions_k255_619690_1

Organism: H3-16-all-fractions_metab_34

partial RP 25 / 55 BSCG 26 / 51 MC: 3 ASCG 10 / 38 MC: 5
Location: 2..913

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629878 bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 296.0
  • Bit_score: 398
  • Evalue 3.70e-108
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 296.0
  • Bit_score: 373
  • Evalue 4.70e-101
Tax=RBG_16_RIF_CHLX_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 302.0
  • Bit_score: 400
  • Evalue 1.40e-108

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Taxonomy

RBG_16_RIF_CHLX_69_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 912
TGCCATCCGGCGCTGGCCCCCGAGGCCCGGGTGGCCCTGACCCTGCGGACCCTGGGCGGCCTCACCACGCCCCAGATCGCCCGGGCCTTCCTGGTGCCGGAGGCCACGATGGCCCAGCGGCTGGTGCGGGCCAAGCGCAAGATCCGCGACGCCGCCATCCCCTACCGGGTACCGCCCGACCACCTGCTGCCGGAGCGGCTGGACTCGGTGCTGGCCGTCCTCTACCTGATCTTCAACGAGGGCTACGAGGCCAGCGCCGGGGACAGCCTGGTCCGGCGGGAGCTGTGCGCCGAGGCGGTGCGCCTGGGCCGGGTCCTGGCCGAGCTGATGCCGGACGAGGGCGAGGCGCTGGGGCTGCTGGCCCTGCTGCTGCTGCACGACGCCCGCCGGGAGGCGCGGGTCGGCCCGGCCGGCGAGCTGGTGCTGCTGGAGGACCAGGACCGGAGCCGCTGGGACCGGGCCAAGATCGGCGAGGGCGTCCGCCTGCTCGACCAGGCGATCCGCCGCAGCCCGCCCGGGCCCTACCGGCTCCAGGCGTGCATCGCCGCCCTGCACGCGGTCGCCCCGACGGCCGCGGCCACCGACTGGCGGCGCATCCTCCTGCTCTACGATCAGCTCATGGAGGTGGCCCCCTCGCCCGTGGTCGCCCTCAACCGGGCGGTCGCGGTGGCCATGGTGGACGGCCCGGCGGCCGGCCTGGCCCTGATGGACGAGCTGGCCGCCTCCGGCGATCTGGACGGCTACCACCTCCTCCACGCCGGCCGGGCCGACCTACTGCGCCGCCTGGGCCGAGGCCCGGAGGCGGCCACCGTCTACCGCCGCGCCCTCGACCTGGCCACCAACCCCGTCGAGCAGGCCTTCCTCACCCACCGCCTGGCCGAGGTCGGCATGGGTGGGGCACGGCGTGCCTGA
PROTEIN sequence
Length: 304
CHPALAPEARVALTLRTLGGLTTPQIARAFLVPEATMAQRLVRAKRKIRDAAIPYRVPPDHLLPERLDSVLAVLYLIFNEGYEASAGDSLVRRELCAEAVRLGRVLAELMPDEGEALGLLALLLLHDARREARVGPAGELVLLEDQDRSRWDRAKIGEGVRLLDQAIRRSPPGPYRLQACIAALHAVAPTAAATDWRRILLLYDQLMEVAPSPVVALNRAVAVAMVDGPAAGLALMDELAASGDLDGYHLLHAGRADLLRRLGRGPEAATVYRRALDLATNPVEQAFLTHRLAEVGMGGARRA*