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H3-16-all-fractions_k255_7624093_1

Organism: H3-16-all-fractions_metab_34

partial RP 25 / 55 BSCG 26 / 51 MC: 3 ASCG 10 / 38 MC: 5
Location: comp(1..675)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626536 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 211.0
  • Bit_score: 311
  • Evalue 5.80e-82
RNA polymerase sigma24 factor {ECO:0000313|EMBL:ETK37065.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 214.0
  • Bit_score: 325
  • Evalue 5.40e-86
rpoE; RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 211.0
  • Bit_score: 309
  • Evalue 4.80e-82

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGAGCACGCCGACCCGGATCGATGATCTGCTGCGGGAGCTGACGCCGCAGGTCCTGGCCACCCTCGTCCGGCGCTACGGCGACTTCGACACCTGCGAGGACGCGGTGCAGGAGGCCCTGCTGGCGGCCGCGCTGCAGTGGCCGGCCGACGGCACGCCCGCCAGCCCCAAGGGATGGCTGACCACCGTCGCCTCCCGCCGGTGGATCGAGCGGTGGCGCGAGGAGACCGCCCGCCGGCGCCGGGAGCAGACCGCCGCGGCCCTGGCGCCGCCGGAGCCCGAGCCCGTCCCCGGCATCGACGACACCCTCACGGTGCTGCTGCTGTGCTGCCACCCGTCGCTCACCCGGGCATCGCAGGTGGCCCTCACCCTGCGCGCGGTCGGCGGGCTGACCACCGTGGAGATCGCCCGCGCCTTCCTGGTCCCGGAGGCCACCGTGGCCCAGCGCATCAGCCGGGCCAAGCAGCGGATCAAGGCCAGCGGGGCCGAGTTCCGGATGCCCTCGGAGACCGAGCGCCCCGAGCGGATCGCCGCCGTGCTCCAGGTGCTGTACCTGATCTTCAACGAGGGCTACACCGCCAGCGCCGGACCGTCGCTGCACCGCGTCGAGCTCACCAGCCACGCCATCCGCCTGGCCCGCCAGCTCCGGGCCGGACCTGCAGCTCGTCGAGCTGGC
PROTEIN sequence
Length: 225
VSTPTRIDDLLRELTPQVLATLVRRYGDFDTCEDAVQEALLAAALQWPADGTPASPKGWLTTVASRRWIERWREETARRRREQTAAALAPPEPEPVPGIDDTLTVLLLCCHPSLTRASQVALTLRAVGGLTTVEIARAFLVPEATVAQRISRAKQRIKASGAEFRMPSETERPERIAAVLQVLYLIFNEGYTASAGPSLHRVELTSHAIRLARQLRAGPAARRAG