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H3-16-all-fractions_k255_6633388_4

Organism: H3-16-all-fractions_metab_34

partial RP 25 / 55 BSCG 26 / 51 MC: 3 ASCG 10 / 38 MC: 5
Location: comp(2865..4661)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BB37_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 403.0
  • Bit_score: 120
  • Evalue 2.90e-24
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 403.0
  • Bit_score: 120
  • Evalue 8.30e-25
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ91801.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.3
  • Coverage: 403.0
  • Bit_score: 120
  • Evalue 4.10e-24

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1797
TTGGTCGCTCGGTGGGCCGCGGCGGCGCCGGTGGGTCCAGGCGGCCGCGTTGCGGGTCACGGATCGGTTCGGACGCGGGCGGCTCGCCCGGTCGAGGCGCCGGCGGGCCCGGCGGTCGAGGCCGGAACGCCGACGGCGGCGGGCTCGGCGCCCGCTCGACGGTGGAGTCCGCCGCAGCCTCCGGCCATCCGCCGCGGCCTTCAGGCAACGCCCTGGGATCTCCTGGAGGACCATCCGGCCGCCCGCGGGCACCGACGTCCAACCCCGCCGGTCCATCCGGCCGTCGAGCGGGAGCCGCAGGCCCGGGGAAATCCTCCTTCAGGCGCTCCAGCCGGCGGGCGGCGGCCGCGGGCGGTCCGACCGGATCCTCGGCCGGGACCTGCGGGAGCCGAGCAGGGGCCTCGGGCGTTGCTGGAGGGCTCTCCGCCGGAAGGGTTGGGCGCTGGGCGGCGGGGCTGCCCTTGGCAGGCTGGTCCTTCGGGTCCGCCGGACGTGACGCCGTCGGTGGAGTCGAATCGGGCGCTGGGACTGGAGCGCTGTCCGGGCCTGGAGCAGCGGTTGGGCCAGGAACAGTCGACGGGGGCGCCGGAGCTGCAGGGGGCACCGGAGTTGGGGCCGTTGCCTCCCCCGTTGGGCGTCGCTCGCGCCCTTGGCGGCTCTCCTGATCGGCGCCGAACCAGCTCGCAGGTGGAGCGGGCGGCGACTCCGATCCCAGGTCGCGATCGATGGGAGAGGGAGGCTGGCCGACAGTGGGATGGTGAGAGGTCGGCGGCTCCGGCGCGGTTTCGGTGTCCTGCTCGCGAGCGACCGGCGGGGACTTCTGTGAGGTCCGCTCCGCCCCGCGCCAGGCCGATCCCTCCCCGGACCAGGCCGACCCCGCGTCGCCCTCAGCCGACTCGGTCTGGTCTCCGATCGACCGGGCCTCGGGCCTGGAAGACCCGGCCTCGCCCCCTGCCCTCCCCGCTTCGCTCGGAACCGACTCGACCCCACCCTCGGTCGACTCCCCTTGGCGCCCGGCGGACCCCGCCTCGTGCCCAGCCGACGCCGCCACCCGCCCGCTCGGCTCCGCTTCCCGCGCAGGGGACGGCGTCTCGGGTCCCGCAGCCGCTGGGTCCGGACCGCCTCTGGGACGCCGCCCCACCCCGGTGGCCGCACCCGGCCCGGCGTCGCCCTCGCTCCTCCACCCGGGGTCCCCCTCCGGTCCCCCGCCCGGTCCGTGCTCCACTGCCGCGGTCGCTGTCGGCGCGGGAACCTGGGTCTCCGCCTGGACCGACGTCGGCGGAGAGCCGGGCCGACCGGGGTCGCCATCGGGCCCGGGCGGCGGGGCCGGTGGCGGCTGCCCGCCTCCCGGGTCCGCCGAGCCGGCGTGTTGCTCAGGCGGGGCCGCGACCGGCTCGCGGATGGGTTGCTCCCCGCCCGGAGCGGACGGACCGGACTCGGGATCGGCGTGGGCGTGGCCGGACGTCACAGGAGGCGCCTCCGGAGCACGGTCGCCGGGACCCGGTGGCGGAGCGGCCTCGCCTGGGCGCGGGGCCGCGAACCGCCTGGCCGGCGGCGTGGACGTGCTGGTCTCCTCCGAACCGAGGTCCGGCGGCGGGTCCGACTCGGACGGTTCGGCCGGTTCTGGCCGGTCTGGTGGGAGAGGCCCTGACCGGGAGGCTGGGTCGGTCGTCTGGTCCACGCAAGCTCCCTCGTGCGGCCCCCCGGGCGGGCGTTGGGCCCAGCCTATCGAGGCGGGGACGCTTCTGCGAAGACTGTCCACAACCTGGGAGGTCCCATACCGCCGGCCGCCGCTGA
PROTEIN sequence
Length: 599
LVARWAAAAPVGPGGRVAGHGSVRTRAARPVEAPAGPAVEAGTPTAAGSAPARRWSPPQPPAIRRGLQATPWDLLEDHPAARGHRRPTPPVHPAVEREPQARGNPPSGAPAGGRRPRAVRPDPRPGPAGAEQGPRALLEGSPPEGLGAGRRGCPWQAGPSGPPDVTPSVESNRALGLERCPGLEQRLGQEQSTGAPELQGAPELGPLPPPLGVARALGGSPDRRRTSSQVERAATPIPGRDRWEREAGRQWDGERSAAPARFRCPARERPAGTSVRSAPPRARPIPPRTRPTPRRPQPTRSGLRSTGPRAWKTRPRPLPSPLRSEPTRPHPRSTPLGARRTPPRAQPTPPPARSAPLPAQGTASRVPQPLGPDRLWDAAPPRWPHPARRRPRSSTRGPPPVPRPVRAPLPRSLSAREPGSPPGPTSAESRADRGRHRARAAGPVAAARLPGPPSRRVAQAGPRPARGWVAPRPERTDRTRDRRGRGRTSQEAPPEHGRRDPVAERPRLGAGPRTAWPAAWTCWSPPNRGPAAGPTRTVRPVLAGLVGEALTGRLGRSSGPRKLPRAAPRAGVGPSLSRRGRFCEDCPQPGRSHTAGRR*