ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H3-16-all-fractions_k255_3790213_3

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(2597..4786)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 531.0
  • Bit_score: 386
  • Evalue 6.40e-104
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 531.0
  • Bit_score: 386
  • Evalue 4.60e-104
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 531.0
  • Bit_score: 386
  • Evalue 1.30e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Koribacter versatilis → Candidatus Koribacter → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2190
ATGGAGCACCGCACGGCAGAGATCGCGCAGGCGTTCGGGGCCCCGGCCGAGGGGGCGGAGGGCTTGCTGTCGCTGCACCAGTACGAGCTGCTCTTCGAGATGACGACGCAGCTTCTAGCCGCGCAGAGTCTCGACGAGCAGACCTTGCTCGTGCTCGACACGCTGACGGCTGGGCTGGGGTACGCGAGCGCGGCGCTCGCACTGGTCGAGCGTCCCCGCGGGGTCTTGCGCGTGCGCGGCGCCGCCGGGTTCGCCGACGACGAGGCGCTGGCGGGGCTTGAGCTGCCGCTCGACTCGAACGCGCCGCACGTGCGCGTCGTGCACGACGGGCGACCCGCTTGGCTCGCGCGCAACGACGAGTCGGCCGCCGAGTTTTTGCGACAGGTCGGCGGCCAGACGGATGTGCTCGCGCTCCCGCTCTTCGGCGGGCAACTACACGCCGAGCCGCGCGCCACGGGCGACCTGACCGGCTCGTTGCGCGCAGAGGCTTCGGAGCGCTTCTGGCTCCCGCAGTCGCTCTCGACCGGCGCGCTCTACGTCGGCGCCCGCCGCGACGAAGCGGACAAGTCGCAGATCACACTGCTCACGCGCTACGCCGGCCGCATCGGCGCCATCCTCTCACACACCGCCCACGTCGAGCGCCTCAGCTCCTCCGTCTACAAGCTCCAGCGCGAGCGGCAGTGGGTCGAGTCCATCATGAAGTCGGTGGCCGACCCCATCGTCCTCACCAACATGGACAACGAAATCCTGCTTCAGAACCGCCGCGCCGAGGAGTTGTTCAGCGACCGCCGCGACGCGAACGAGGGCAAGCGCCGTGCGCTTGAGATGAACGACCTGCTCTTCTCGGCCTACCTTTCAAGCGCGGCGGTCGCTTCGGAAGAGGTGGTCGGGCGCGACCTCATTCTCGTAGACCCCATCGAGGGCTCGGACATACACTTCGAGGTCATCTCCACTCCGGCCCTCAACGCGCGCGGCGAGCGCATCGGCCTCGTCTCCATCTTCCGCGACGTGACCGACCTGCGCCGTGCCAACGAAGAGCTCGCGCGCAACTTCGTCAAGCTTCAACAGGCCGAGAGTGAAGCGCGGCGCGAGCGCGACCGTCTCGACCTCATCCTCGAACACGTCGGCCAGCCCATCGCGGTCTGCGACACGTCGGGCAAGTTCATCCTCTTCAACCAGCGCGCCGAACTCCTCTTTCAGGAGCGCGACGGGATGCCGCGCGGCGCCCTGCGTGCCGTGCGCAACAACTCGGTCAAGCTCACCTCGTTCATCTCCGCTCTCGCCTCGGGCGCGGAGTCGGGGCGTCAGGCCGAGATCGAACTCATCGACCCGCAGACGACCAACTCGCTGCCGATGGAGATTACGTCCGCCGAGGTGATGGACGCGAAGGGGCAGGTGACGGCCGTCGTCTCCGTGCTCCACGACCTCTCCGAGATACGCGAGCTTGAACGGCGCAGGGTCGAGCAGCAGCTCTTCGAGTCGGAGAAGCTCGCCGCGGTCGGCCGCCTCGCCGCCTCCATCGCGCACGAGGTCAACAACCCGCTCGAAGCCATCAAGAACTCGCTCTACTTGCTCTCGTCGGGCAAGAACATGGACATCGAGAAGAACTCGCGTTTTCTGGAGGTGGCGCGCAAGGAGACCGAGCGCGTCTCGCACATCATCCGCCAGATGCTCGGCTTCGCGCGCCGCTCGGGCGAGGTCGAGTGGGTCGCGGCCAACCAGATCATCGAAGAGACGCTGATCCTCGTCGAGAAGAAGATGAAGCAGGCGCGCGTCGAGGTCGTCCGCCACTTCGACCCGCAACTGCCCAAGGTGCGCGCGCGCCCCGACCAACTGCGACAGGTCTTCCTCAACCTCCTTCTGAACGCGCAGCAGGCGATGGAGAAGGGCGGGCGCATCACGGTGCGCACGTCCCGTTACGAACAGGCGTTGCAGCCGACCATCTCCGTCCAGATCAGCGACACGGGGCGCGGCATTTCGGAGGCAGACCTCGCGCGCATCTTCGAGCCCTTCTTCTCGACGCGCTCGAAGGGGACGGGGCTCGGGCTCTGGGTCACGCAGGACATCGTGCGCCACCACGGCGGCCGCATCGAGGCGACGAGCGAGGAGGGCGCGGGCACGACCTTCAACGTCATCCTCCCCGTGGACTCGCCGACCCTTTCGGAGGTCGATGCCGGAACTAAGCACTGA
PROTEIN sequence
Length: 730
MEHRTAEIAQAFGAPAEGAEGLLSLHQYELLFEMTTQLLAAQSLDEQTLLVLDTLTAGLGYASAALALVERPRGVLRVRGAAGFADDEALAGLELPLDSNAPHVRVVHDGRPAWLARNDESAAEFLRQVGGQTDVLALPLFGGQLHAEPRATGDLTGSLRAEASERFWLPQSLSTGALYVGARRDEADKSQITLLTRYAGRIGAILSHTAHVERLSSSVYKLQRERQWVESIMKSVADPIVLTNMDNEILLQNRRAEELFSDRRDANEGKRRALEMNDLLFSAYLSSAAVASEEVVGRDLILVDPIEGSDIHFEVISTPALNARGERIGLVSIFRDVTDLRRANEELARNFVKLQQAESEARRERDRLDLILEHVGQPIAVCDTSGKFILFNQRAELLFQERDGMPRGALRAVRNNSVKLTSFISALASGAESGRQAEIELIDPQTTNSLPMEITSAEVMDAKGQVTAVVSVLHDLSEIRELERRRVEQQLFESEKLAAVGRLAASIAHEVNNPLEAIKNSLYLLSSGKNMDIEKNSRFLEVARKETERVSHIIRQMLGFARRSGEVEWVAANQIIEETLILVEKKMKQARVEVVRHFDPQLPKVRARPDQLRQVFLNLLLNAQQAMEKGGRITVRTSRYEQALQPTISVQISDTGRGISEADLARIFEPFFSTRSKGTGLGLWVTQDIVRHHGGRIEATSEEGAGTTFNVILPVDSPTLSEVDAGTKH*