ggKbase home page

H3-16-all-fractions_k255_7237647_7

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 7068..7733

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024Q0_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 192.0
  • Bit_score: 187
  • Evalue 9.50e-45
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 192.0
  • Bit_score: 187
  • Evalue 2.70e-45
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 189.0
  • Bit_score: 198
  • Evalue 5.80e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGGCAGTTTCCCAACAACAGACGGACGCGGATCTACTCCGGCAGATGCTGGCCGGGGATGATGAGGCGTTCACGGCGCTCTACCGGCGCCGGCAGGGCGGCGTCTATCGCTTCGCCTTGCAGATGAGCGGCTCCGAGGCGGTCGCCGAAGACGTGGTGCAAGAGACCTTCATGGTCTTGATGCGCGACGGCGGCAACTTCGACGCGGGGCGCGGGTCGGTTTCGGCCTACCTCTACGGCATCGCGCGCAACCACGTCCTGCGCGCCTTCGACCGCGAGCGTGCGCTCGTCCGCTTCGACGACGAGGCAGAGGAGGGCGGCGAGCTGCCGCACGAGAATCTCGTCGCGCGACCCGACCCCTTGGGCGACCTGACGCGCGCCGAGTCGGTCGAGAAGTTGAGGCAGGCGGTGCTCGCGCTGCCCGGTCACTACCGAGAGGTCGTCGTGCTCTGCGAGCTGCACGAGTTGAGTTACGTCGAGGCGGCCGAGACGCTCGGGTGCGCGGTCGGCACCGTGCGCTCGCGTCTGCACCGTGCGCGCGCGATGCTCGCCGCGAAGCTGCGCGGGCGACGCGAAGAGGCGCGCGAGGGCGGCGCCGAGTTTGAAGATGGAGGCACCGCTTCTGCACCGGGTCAGGCTTTAAGGACGGCGAGGTGTTTCGCATGA
PROTEIN sequence
Length: 222
MAVSQQQTDADLLRQMLAGDDEAFTALYRRRQGGVYRFALQMSGSEAVAEDVVQETFMVLMRDGGNFDAGRGSVSAYLYGIARNHVLRAFDRERALVRFDDEAEEGGELPHENLVARPDPLGDLTRAESVEKLRQAVLALPGHYREVVVLCELHELSYVEAAETLGCAVGTVRSRLHRARAMLAAKLRGRREEAREGGAEFEDGGTASAPGQALRTARCFA*