ggKbase home page

H3-16-all-fractions_k255_8164866_4

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(2587..4947)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 699.0
  • Bit_score: 616
  • Evalue 4.10e-173
DNA topoisomerase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P491_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 777.0
  • Bit_score: 639
  • Evalue 3.20e-180
topB: DNA topoisomerase III similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 699.0
  • Bit_score: 616
  • Evalue 8.30e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2361
ATGAGAGTAATCGTCACCGAAAAGCCTTCGATGGGGCGGGACGTGGCCGCGGCCTTGGGGGCGACGCGGCGGGGCGAGGGCTTTATCTCGGGCGAGTCGGACATCGTGACGTGGTGCGTCGGGCATCTGGTCGAGCTTGACGACCCGCAGGCTTATGACGCGCGCTTCGAGCGTTGGCGTGTGGAAGATTTGCCCATCCTGCCGGACGAGTTCAAGTACCATCCTTCGGAGCGCACGCTCGATCAGTTCAAGGTCATCCGCGCCTTGCTCGGGCGCGAGGACGTGACGACGGTTGTCAACGCGGCCGACGCGGGGCGCGAAGGCGAGCTGATCTTTGACCTCGTCTACGCGCTCGCGGGCTGTCGCAAGCCGGTCGAGCGCCTCTGGATTTCGTCGCTCACGCGCGATGCCATCATCGAGGGCTTCCGGAAGTTGAAGCCAGCCGAAGAGTACAGGGGCCTCCGCGACTCGGCGCACGCGCGGCAGCGCGCCGATTGGCTCGTCGGCATCAACGCCACGCGCGCGCAGACGGTGCGCGCGCGCCGCGCAGGGCACGAAGGCGTCTTCTCGCTCGGCCGCGTCCAGACGCCGACGCTCGCCCTCATCGTCGAGCGCGACAGAGAGATTTCAGAGTTCGTCCCCACAGACTACTTCGAGGTCGTCGCAGACTTTCGCGCACCCGGCGGCGAGTACCGCGGGCGCTGGTTCGGCAAAGACGGCAGCCGCTTCGACAAGAAGGAGGACGCCGAGGCCATCGTCGCCAAAGTCGGCGGCAAGCAGGGCGAGGTCAAGCAGGTCGAGAAGAAGGCCGCGCGCGAGAAGCCGCCGCTCTTACATGACCTGACTTCGCTACAGCGCGCGGCCAACGTCCGCTACGCCTTCACGGCGACCAGGACTTTGGAGCTGGCGCAGACGCTCTACGAGAAGAAGTTCCTCACCTACCCGCGCACCTCCTCGCGCCACCTCTCGAAGGCCGTGGCCGAAGAGATTGAGGCGCACGTCCGCGCCGCTTCGGTCGGCCCTTACGTTCCCTTCATCGAGAAGATTCTCGCGAATGGCAAGCCGCGACTTACGAGCCGCCACGTTGACGACAAGAAGGTCACAGACCACCACGCCGTCATCCCCACCAAGCAGAAGATCAACGCCGACGCGCTCTCGCCCGACGAGAAGCGCATCTATGACTTAGTCGCGCGCCGCTTCCTCGCCGCCTTCTTCCCCGATGCGGAGCTTGAGCGCACGACGGTCGTGACGGAGGCCGAGGGCGAACGCTTCATCACGCGCGGCACGGTCGTCTTGAAGGCCGGTTGGCGCGAGGTCGAGCCGCCCGGACGCGGCGGCGCGAAGTCTGCGGAAGAGGGCGCGAAGAAGTCGGGCGAGGACGATGATGAGGAGGCAGCGGAGCTGCCGCCGCTCAAGGCGAAAGACCCGGCCGAGGTCGCGCACGCGGAGGCGCAGGCGAAGCAGACGAAGGCGCCGCCGCGCTACTCTGAGTCGAGCCTTCTGGGCGCGATGGAGACGGCGGGCAAGAAGGTCGAAGACGAGGAGCTGCGCCTCGCGATGAAGGAGGCGGGCTTAGGGACTCCTGCCACGCGCGCCTCCATCATCGAGACGTTGTTGAAGCGCGAGTACGTCACGCGCGAGAAGAAGTCTCTGGTGGCGACGGCGAAGGGCGCGGCTCTCATCAAGATGCTCCCGAGCCCGCTCCTCAAGTCGGCCGAGCTGACCGGCCGCTGGGAGCAGAAGCTCTCGCGCATGTCGCGGCGCGAGTATGAGCTGGACGCCTTCATGGTCGAGGTGCGCGCGATGGTCTCGGAGCTGGTCGCGCAGATTGCGGGCTCCGAAGTCGAGCGCCCCACAGGGGCTTCGGCGCCCGCGCGACAGTTGCCCAGACCCGAGGGCGCGCTCGACTGCCCGAAGTGCAAAAGGGAAGAGCGCGCGGGCTTCTTAGTCGAGCGTGAGGGCGCGGCCGGCAAGTTCCTCGCGTGCTCCGCGGGACGCGAGGCGTGCGGTTATCTGAGCGACGCGCCGAAGAACGCGAAGCAGCGCAAGGCGCTTCTGCAAACCTCCTGTCAGACCTGCGGCGGCGCGATGCGCCTGCGCCTGCCGAAGGAGAAGGGCAAGCACGCCTTCCTCTCCTGCGTCCGCTACCCGGACTGCCGCGGCGCGCGCTGGTTCGACGAGCGAGGCGCGCTCGAAGAGCCGCGCCCCGCGCCCGAGACGGGCCCGCCCTGTCCACTCTGCAACACGCCGATGCTCAAGCGCGGCCCCACCTCCGCCGGCAGCTTCTTCTGGTCGTGCCCGCGCTGGCGCAGCGACGGCTCCGGCTGCAACTCGAAGCCCGTCTGGATCAACGAGCGCTAA
PROTEIN sequence
Length: 787
MRVIVTEKPSMGRDVAAALGATRRGEGFISGESDIVTWCVGHLVELDDPQAYDARFERWRVEDLPILPDEFKYHPSERTLDQFKVIRALLGREDVTTVVNAADAGREGELIFDLVYALAGCRKPVERLWISSLTRDAIIEGFRKLKPAEEYRGLRDSAHARQRADWLVGINATRAQTVRARRAGHEGVFSLGRVQTPTLALIVERDREISEFVPTDYFEVVADFRAPGGEYRGRWFGKDGSRFDKKEDAEAIVAKVGGKQGEVKQVEKKAAREKPPLLHDLTSLQRAANVRYAFTATRTLELAQTLYEKKFLTYPRTSSRHLSKAVAEEIEAHVRAASVGPYVPFIEKILANGKPRLTSRHVDDKKVTDHHAVIPTKQKINADALSPDEKRIYDLVARRFLAAFFPDAELERTTVVTEAEGERFITRGTVVLKAGWREVEPPGRGGAKSAEEGAKKSGEDDDEEAAELPPLKAKDPAEVAHAEAQAKQTKAPPRYSESSLLGAMETAGKKVEDEELRLAMKEAGLGTPATRASIIETLLKREYVTREKKSLVATAKGAALIKMLPSPLLKSAELTGRWEQKLSRMSRREYELDAFMVEVRAMVSELVAQIAGSEVERPTGASAPARQLPRPEGALDCPKCKREERAGFLVEREGAAGKFLACSAGREACGYLSDAPKNAKQRKALLQTSCQTCGGAMRLRLPKEKGKHAFLSCVRYPDCRGARWFDERGALEEPRPAPETGPPCPLCNTPMLKRGPTSAGSFFWSCPRWRSDGSGCNSKPVWINER*