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H3-16-all-fractions_k255_9191585_23

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 23356..23958

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 189.0
  • Bit_score: 161
  • Evalue 6.60e-37
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 196.0
  • Bit_score: 257
  • Evalue 9.50e-66
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 192.0
  • Bit_score: 162
  • Evalue 1.10e-37

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGATCGCACACGCAGTTTCCCCGACGAACACAGCCGACACCGAGTTGGTCGTGCGCGCACTCGCCGGCCGCGAAGACGGCTTCGAGGAGTTGGTGCGCCGCTACCAGCGCCCCATCGTGGCCTACGTCTACCGCATGGTCGGCGACTACGACTCGGCGCTCGACCTCGCGCAGGAGGTCTTCATCAAGGTCTACAACTCGCTCGAACGCTATCGCCCCGAGTTCAAGTTCTCGACCTGGATTTATCGCATCGCGCACAACGCGGCCATCGATCACCTGCGCCGGCAGGGTGCCTCGCGCACCGAGGAGATAGAGGTCGAGGGGCCCGAAGGCACGACCTTCGAGAAGCCTCTGGCGAGCAAGGCGCCCACGCCCGAGCAGGAGACCGAGCGCGGCGAGCGGCGCGCGGAGATCGAAGAGGTCGTCGCGCAGCTCTCGCCCGCCTACCGCGAGCTGATTGTGCTTCGACACTCGCACGACCTCAGCTACGACGAGATTGCCGAGGTGACCAGTCTCCCCTTGGGCACGGTCAAGAATCGAATCTTCCGCGCACGCGAGTCGATGCGAGAGCTGCTCGTGGCGCGCGGCATCACGGGGATGTAG
PROTEIN sequence
Length: 201
MIAHAVSPTNTADTELVVRALAGREDGFEELVRRYQRPIVAYVYRMVGDYDSALDLAQEVFIKVYNSLERYRPEFKFSTWIYRIAHNAAIDHLRRQGASRTEEIEVEGPEGTTFEKPLASKAPTPEQETERGERRAEIEEVVAQLSPAYRELIVLRHSHDLSYDEIAEVTSLPLGTVKNRIFRARESMRELLVARGITGM*