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H3-16-all-fractions_k255_5620505_1

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(3..554)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CDM64330.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 182.0
  • Bit_score: 105
  • Evalue 4.20e-20
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB id=12556442 bin=CNBR_ACIDO species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 166.0
  • Bit_score: 89
  • Evalue 2.90e-15
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 132.0
  • Bit_score: 63
  • Evalue 3.70e-08

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGAAGAGAGACCCGAGAAGTCAGAGCAGACGGAAGAGTTGTCAGTCGTTAAGCGCGTCGAGCACGCGCGCGTGACGATGCCGCGACGTTCGAGAACGAGAGTTGTCATCATCGTCGCCCTCTTCGCGGCGGCCTGCGTGGTGCTTCTCTTCTGGTGGCTCAACCGCTCGGGTGGAAACTCGGGTCGCGTCGTGACGGCGCCGCGCGCGGTCACCTTCGACCAGCCGGAGGCGGGCGCTCCTGCGAGCGGCACCACGGCCGCACCCGGCGAGGCGACGCTCACTGTCGCGCCCGACGTGGCCGCGCGCGCCGGTATCAAGGTCGAGGCCGTGGGCGAGCAGCTCGCGCCAGAGGCTTTGCAGCAGGCGGCGACGGGCGTCGTGCAGGCCAACGCGTATCGCTCGACGCCGGTCATGTCGCTGGTCGGCGGGCGGCTCTTGAGCGTCGCGGCCGAGGCCGGACAGGAGGTGCGTCGCGGCCAAACGCTCGCCGTCGTCTTCAGCGACGAGCTGGCGTCGGCGCAGACGCGCTACCTCTCCGCGCAGGCCGAG
PROTEIN sequence
Length: 184
MEERPEKSEQTEELSVVKRVEHARVTMPRRSRTRVVIIVALFAAACVVLLFWWLNRSGGNSGRVVTAPRAVTFDQPEAGAPASGTTAAPGEATLTVAPDVAARAGIKVEAVGEQLAPEALQQAATGVVQANAYRSTPVMSLVGGRLLSVAAEAGQEVRRGQTLAVVFSDELASAQTRYLSAQAE