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H3-16-all-fractions_k255_935133_15

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(11059..12621)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKJ7_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 386.0
  • Bit_score: 308
  • Evalue 1.10e-80
Fis family sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 386.0
  • Bit_score: 308
  • Evalue 3.20e-81
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACY48909.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 386.0
  • Bit_score: 308
  • Evalue 1.60e-80

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Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1563
ATGTCAGGCTTGTCTCCGGAGTCACAGAACGAGACGGGGATGAACGAAGCGCCGAAAGGTTTTCAACTGCCTCTGGCGGCGATGGTTCGGTCGCTCTGCCGGGCAGCCGACACGGGCTCGGACGCGCTGTACGACGTGATGCTGAAGGTCGCGTTGATGGTGGACGCCGCCGCGCACACGTACGGGATGGCGACCTTCTCGCAGAGGTCGGGCGAGCGGGCGTATCTGAAGTGGGTCGAGGGGCTCGACCCGGAGGAGACGATTGACGCGGAGACGACCGTCGAAGCGGTTCTGAGCGGCGCCGAAGCCGGGCAGGAGCCGAAGGCGGGAGACAGGAAAATCTGTCTCGTGCTCTCGGCCACATCGCCGCAGCGCGAGGGCGCGGCCATCTACGGTCGTTTTGTGAGGGCGCTGAACGAGACGCAGGCGTCGGAGCTGAGGATTCTGTCGGACGTGGCGCGGCTTGCGCATTCGCACGCGCGTGTGCGCGAGGAGCTGTACAAGCCTGTGAAGGCGTTCAAGGCGGCCGAGGTGGCCGCGACTTCTTTGCCGGGTATGGTCTTCGTGAGCCGCGCGATGAACTCGCTGGCGCACTCAGTCGAGCGCATCAAGGATTCGGAATCGACCGTGCTCATCACGGGCGAGTCGGGGACGGGCAAGGAGCTGGTGGCGCGCGCCGTACACCGTCTGAGCCGGCGCGCGCAGGCGCCCTTCATCCCTTTCAACTGCACGGCCGCGCCCTCCGACCTCATCGAGAGTCTACTCTTTGGTCACCGCAAGGGCTCCTTCACCGGTGCGCACGTAGACCACGACGGGCTCATACGTGCGGCCGAGGGCGGCACGCTCTTTCTCGACGAGATAGGAGACCTGCCGCTCGCGTTGCAGCCGAAGCTCTTGCGCTTCTTACAGGAGGGCGAAGTCCACACGCTCGGCGAGCGCGCGCCGCGCAAGGTGAACGTGCGTGTGCTGGCGGCAACGCACAAGGACTTGTACAAGGCCGCGCAGGACGGGACGTTTCGCGAAGACCTCTACTACCGCGTCGCGGCCTTGACGGTGCACGTGCCGCCTTTGCGCGAGCGACCCGAGGACATCGGCGCGCTCATCTCACACTTCCTCTCGCATTACGCGCGGCGCAACGAGCGTGCGGTGGCGGGCATCACGGCCGATGCTATCAGTGTGCTTCAGAGCTACGCGTGGCCGGGGAACGTGCGCGAGCTGGCGGCGGAGATCGAGCGGCTGGTGCTCTACACGGACGAGGGCTGCTACATCGGGACGGAGAACATCAGCGCGCGCGTGCTCCCTTCAGAGGAGCGGCACACGCAGCCCGAGGCGGCGGGGCAGGTGCCGGCGCATTTAGAGAACATGCTCGAAGACTACGAGCGGCGCGTCATCACCGAGACGCTCAGGCGGAACGACTACAACGTGGCGCGCGCGGCGGTGGCTTTGGGCCTCGGCTCGCGCCAGACGCTTTATAAGAAGCTGAAGCGGCTGACGATCAACGTCGGCGACTTCCTACAGGACGAGCAGCAGCACGGCCTGCAACTGCGCGCCGACAGGATTTAA
PROTEIN sequence
Length: 521
MSGLSPESQNETGMNEAPKGFQLPLAAMVRSLCRAADTGSDALYDVMLKVALMVDAAAHTYGMATFSQRSGERAYLKWVEGLDPEETIDAETTVEAVLSGAEAGQEPKAGDRKICLVLSATSPQREGAAIYGRFVRALNETQASELRILSDVARLAHSHARVREELYKPVKAFKAAEVAATSLPGMVFVSRAMNSLAHSVERIKDSESTVLITGESGTGKELVARAVHRLSRRAQAPFIPFNCTAAPSDLIESLLFGHRKGSFTGAHVDHDGLIRAAEGGTLFLDEIGDLPLALQPKLLRFLQEGEVHTLGERAPRKVNVRVLAATHKDLYKAAQDGTFREDLYYRVAALTVHVPPLRERPEDIGALISHFLSHYARRNERAVAGITADAISVLQSYAWPGNVRELAAEIERLVLYTDEGCYIGTENISARVLPSEERHTQPEAAGQVPAHLENMLEDYERRVITETLRRNDYNVARAAVALGLGSRQTLYKKLKRLTINVGDFLQDEQQHGLQLRADRI*