ggKbase home page

H3-16-all-fractions_k255_1532753_4

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 2045..2560

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 170.0
  • Bit_score: 251
  • Evalue 5.80e-64
Peptide deformylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN4_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 166.0
  • Bit_score: 204
  • Evalue 7.60e-50
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 166.0
  • Bit_score: 204
  • Evalue 2.10e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGCACTTTTGGAGATTGTGAAGTACGGCGAGCCGGTGTTGGAGACGCCGGGTGAACACGTGACGGAGTTTGACGCGGGGCTGAAGCGTCTCGTCTCGGACATGTTCGAGACGATGTACGCGTCGCGCGGGGTGGGCTTGGCGGCGCCGCAGATCGGCGTAGCGAAGCGCCTGTTCGTCATGGACTGCTCGGGCGGCCGTGACCCGGAGGCGCGCGTCGCGCTCATCAACCCCGTCGTGCTCAACGTCGAGGGTGAGCAGACGGGCGACGAGGGCTGCCTCTCCTTCCCCGGCATCTTCTTTCAGGTGAAGCGCAACCTGCGCGCCGTCGTCCGCGCACAGGACTTGAGCGGTGAAGAGTTCGAGTTCGACGGTCTCGACCTCGAAGCGCGCTGCATGCTCCACGAGACAGACCACTGCGACGGCATCGTCTTCATCGACCGCACCACCTCACTCAAGCGCGAGCTGGTCAAGCGCAAGATCAAGCGGCTTCAGAAGCAGGGGCGCTGGGTCTAG
PROTEIN sequence
Length: 172
MALLEIVKYGEPVLETPGEHVTEFDAGLKRLVSDMFETMYASRGVGLAAPQIGVAKRLFVMDCSGGRDPEARVALINPVVLNVEGEQTGDEGCLSFPGIFFQVKRNLRAVVRAQDLSGEEFEFDGLDLEARCMLHETDHCDGIVFIDRTTSLKRELVKRKIKRLQKQGRWV*