ggKbase home page

H3-16-all-fractions_k255_5005188_2

Organism: H3-16-all-fractions_metab_maxbC_4

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(707..1411)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7ZC61_BDEBC similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 239.0
  • Bit_score: 147
  • Evalue 8.80e-33
whiG; RNA polymerase sigma 28 subunit WhiG similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 232.0
  • Bit_score: 148
  • Evalue 1.50e-33
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 232.0
  • Bit_score: 148
  • Evalue 7.30e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermoanaerobacter kivui → Thermoanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 705
GTGGAACAGAAAAATAACCCGCAAGATACTTCTCGGCAGGAAATCATAAAAAATTTCATGCCCACCATCCGCTACTGGGCACGCCACTATCATTACCACTATCACCAGGTGCTCGACATGGAAGACCTTGTGATGGTTGGAGTGATTGGCCTCATCGATGCCATGAATAAGTATAAGAAGGACAAGAAAAACCAGTTCAAGACCTACGCAGAATTTCGTATTCGCGGAGAGATTATTGATGAGCTCCGGAAACAGGACTGGATGACGAGATCTGAGAGAACCAAGCAGAAAAAATATCAGCGCGCAAAGAACAATCTCACTGACGAACTCGGGCATGTGCCGAGCCAGGAAGAATTGATGAATGTTCTTCCCTTTAAGCCAAAAGACATGATCCGCCTTGAGCAATACGAGAAAGGTGACACGATCAAGCCTTACATTGAAGGTGAAACCAATGGCCTCGGCACTCTCGCGAACTCAGAGTTTGATTCGTATGCGCTGAAGAAGACTCTTTCGGTTGTGATGGAAGAGCTTCCGAAAACCATGAAGCTCATCGTGACGTTAAAATATTTTGAGGATCTCAACTTCTTTGAGATTTCAAAAATCGTGAATCTTTCGGAAGGACGAATTTGCCAGCTTCACGCCGAGGCGATTGAGATGATGAAAAAGTTTCTTGAGGATAAAAAAATTGATATCCTAGCGGCATGA
PROTEIN sequence
Length: 235
VEQKNNPQDTSRQEIIKNFMPTIRYWARHYHYHYHQVLDMEDLVMVGVIGLIDAMNKYKKDKKNQFKTYAEFRIRGEIIDELRKQDWMTRSERTKQKKYQRAKNNLTDELGHVPSQEELMNVLPFKPKDMIRLEQYEKGDTIKPYIEGETNGLGTLANSEFDSYALKKTLSVVMEELPKTMKLIVTLKYFEDLNFFEISKIVNLSEGRICQLHAEAIEMMKKFLEDKKIDILAA*