ggKbase home page

H3-16-all-fractions_k255_1017959_26

Organism: H3-16-all-fractions_metab_conc_40

near complete RP 45 / 55 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 23533..24105

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 196.0
  • Bit_score: 99
  • Evalue 2.20e-18
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 175.0
  • Bit_score: 94
  • Evalue 2.70e-17
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 178.0
  • Bit_score: 167
  • Evalue 9.40e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
TTGGAGCAGATAAGGGAAATATTGCTGAACAGGGAGAAAGGGCTTAAGTGGCTCTACGAAACGTATGGCCGCAAGCTCCTCGGTTATTCCATCAGCGTATACAGGCTCCAGGAGGATGCGGGTTGGGACCTTGTTTACAAAACGATCTACCGCATCCTGGATGTTGCTCCTGATTATGAGTTTGAGAATGAACAAAAATTAGGCTCCTTCATCTTTAAGGTTTTTATTAATTACTTAAAGAACCATATACGTGATGAAAACACCAGGACACAGGGGGCGCAGTTCATTTCACTGGAAGAAAGCCGTAAAGATTATGGTGTAAGAAATGATAAGCCTTCAACAAATCCGCACATGAGTTCTTTAAAGGAAGAGCTGGATAAGCTGGAGGACTGGCAACGGATCTTACTGCTGATGCGGAGCCAGGACATGTCCTATGCGGAAATTGCAAAATATGTTGATAAGCCGGAAGCGCAATTGAAAGTATATTACCAGCGCCTAAAGAATGCCTTAGCCGAAAGAATGAAAGCAAAACTGAAAGAAAAAGAAGCTTTAAGAAATGCCACACAACGATAA
PROTEIN sequence
Length: 191
LEQIREILLNREKGLKWLYETYGRKLLGYSISVYRLQEDAGWDLVYKTIYRILDVAPDYEFENEQKLGSFIFKVFINYLKNHIRDENTRTQGAQFISLEESRKDYGVRNDKPSTNPHMSSLKEELDKLEDWQRILLLMRSQDMSYAEIAKYVDKPEAQLKVYYQRLKNALAERMKAKLKEKEALRNATQR*