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H3-16-all-fractions_k255_6570166_17

Organism: H3-16-all-fractions_metab_conc_40

near complete RP 45 / 55 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 12844..13392

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2N1_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 183.0
  • Bit_score: 189
  • Evalue 1.60e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 183.0
  • Bit_score: 189
  • Evalue 4.50e-46
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ80710.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 183.0
  • Bit_score: 189
  • Evalue 2.20e-45

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 549
TTGAAGTGGGTAGACAAATACGGCAATTACCTGCTGAACTTTGCTTTCCTGAGGATCAATAAGCAGGAGCTCGCGGAGGATCTTGTACAGGATACATTTTTATCTGCTCTCAAGGCTAAGGATCAATTCCGCGGAGACGCTTCGGAGAAAACCTGGCTCACCGGGATCCTGAAGAACAAGATCATTGATCATTATAAAAAAGCGTCCACCCGCTACGAAATGCGTGAAATGGATAACAGCAGGGCAGGAGCGGACTACGGTTACTTTTTCAGTGAAGAACATAATGGTCACTGGGTAGAGAAGCAGGGCCCGTCCGAATGGGGTGAGTCATCGCTTGAATCAAAAGAATTTTTTGAGATCTTTAACCAGTGCATGGCTAAACTGCCTGAAAAATGGGCCATGGCTTTCAGTATGAAAACCATCGATGAGCTGAGTTCAGAAGAGATCTGTAAGGAAATGCAATTAAGCTCGTCTAATTTTTGGGTTATTATTCACCGGGCAAAGCTACAATTGCGCGCCTGCATTGAAAAAAACTGGATAAGGAATTAA
PROTEIN sequence
Length: 183
LKWVDKYGNYLLNFAFLRINKQELAEDLVQDTFLSALKAKDQFRGDASEKTWLTGILKNKIIDHYKKASTRYEMREMDNSRAGADYGYFFSEEHNGHWVEKQGPSEWGESSLESKEFFEIFNQCMAKLPEKWAMAFSMKTIDELSSEEICKEMQLSSSNFWVIIHRAKLQLRACIEKNWIRN*