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H3-16-all-fractions_k255_2685578_1

Organism: H3-16-all-fractions_metab_43

partial RP 17 / 55 MC: 2 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1..726)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003742A20 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 228.0
  • Bit_score: 256
  • Evalue 1.40e-65
RNA polymerase sigma-70 factor of ECF subfamily {ECO:0000313|EMBL:GAM98024.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 229.0
  • Bit_score: 265
  • Evalue 7.20e-68
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 228.0
  • Bit_score: 253
  • Evalue 5.70e-65

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Taxonomy

alpha proteobacterium U9-1i → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
TTGCCAGCGCCCAGCTACAACACGCTTGACCGGGAAATTGAGCGGATTGCCCGCGAGAGCTACGGCAAGCTGGTTGCCCTGCTTACGGCGGAGTTCCGCGATTTGACGGCTGCTGAAGACGCACTGAGCGATGCGCTCCTGAAGGCGCTCACGCGGTGGCAGGACCGAGGCATCCCGGATTCACCGGAAGCTTGGCTGCTAACTACGGCACGAAGACGATTCCTGGATGAAGCGCGGAGGAAACGAATCCGCGCTTCCCATACTCCGGAATTACTGAACCGGCTTGCCAGTTCCTGTAGCCTTGAGGCTCCTTCCATGCCGGACCGGCGGTTGGGACTTTTTTTCGTTTGCGCGCACCCAGCTATTGACTCGGCAGCGCGAGCGCCCTTAATCCTGCAAACGGTTTTGGGACTGCAGGCGTCCCGGATTGCGGAAGCTTTTCTCGTTTCTGAAACGGCGATGGCCCAGCGCCTGGTCCGAGCAAAACGAAAGATCAGAGACGCAGGCATTCCGTTTCAGGTACCGGCGAGCACGGAGCTTACGGGGCGCCTCCAGGCGGTGCTGGAGGCTATTTATGCGTGTTATGCGGCGGGCTGGTCCACGCCGCTCGGCGCGGATGACGAAAGCCGCGGCTTAGCTGAGGAGGCTATCTGGCTGGCGAGGATTTTGACTGATCTTTGTCCGGACGAACCGGAAGCGATTGGCCTGCTGGCGCTGATTCTGCAT
PROTEIN sequence
Length: 242
LPAPSYNTLDREIERIARESYGKLVALLTAEFRDLTAAEDALSDALLKALTRWQDRGIPDSPEAWLLTTARRRFLDEARRKRIRASHTPELLNRLASSCSLEAPSMPDRRLGLFFVCAHPAIDSAARAPLILQTVLGLQASRIAEAFLVSETAMAQRLVRAKRKIRDAGIPFQVPASTELTGRLQAVLEAIYACYAAGWSTPLGADDESRGLAEEAIWLARILTDLCPDEPEAIGLLALILH