ggKbase home page

H3-16-all-fractions_k255_4264347_3

Organism: H3-16-all-fractions_metab_43

partial RP 17 / 55 MC: 2 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(665..1306)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN56_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 210.0
  • Bit_score: 313
  • Evalue 8.50e-83
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 210.0
  • Bit_score: 313
  • Evalue 2.40e-83
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 210.0
  • Bit_score: 313
  • Evalue 1.20e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Koribacter versatilis → Candidatus Koribacter → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGCGTATGGAAACCATCCAATCAAAGGCGGCAGAAACTGCTGTTTCGGACGAACTAGCGCTGGTCCAGGCTGCGAAACAGGGCGATGTAAGCGCCTTTGAGCAGCTGGTCAAGCGGTATGACCGTAACGTCTTCCGGATCGCGCAGCATATTACGCAAAACCGTGAGGATGCAGAAGACGTAGTTCAGGATGCGTTCCTGAAGGCTTATGAGAACCTAGAGCAATTCCAAGGAAACTCTAAGTTCTACACCTGGCTGGTACGCATCGCGGTCAACGAATCGTTGATGAAGCTGCGTCGCCGCAAGACCAGTAAAACGGTTTCAATGGACGAAGATGTTGAAACGGAAGAGGGTTCCATGCCCCGCGAATTTGCGGATTGGTCCCCAAATCCAGAACAACAGTACGGCCAATCTGAACTGAGTGACATATTGCGCAAAACGATACAAGGTTTGCCAACTAGTTTTCGGACGGTTTTTGTATTACGCGACGTGGAGGGATTGTCCACGGAAGAAACAGCCGAGATGCTCCATTTAAGCGTCCCGGCAGTGAAATCGCGGCTGCTACGGGCGCGCTTGCAACTCCGCGAACGGCTGAATAGGTACTTTAAGAAAAATCAAAACGGAGACGGAAACAACCAGTGA
PROTEIN sequence
Length: 214
MRMETIQSKAAETAVSDELALVQAAKQGDVSAFEQLVKRYDRNVFRIAQHITQNREDAEDVVQDAFLKAYENLEQFQGNSKFYTWLVRIAVNESLMKLRRRKTSKTVSMDEDVETEEGSMPREFADWSPNPEQQYGQSELSDILRKTIQGLPTSFRTVFVLRDVEGLSTEETAEMLHLSVPAVKSRLLRARLQLRERLNRYFKKNQNGDGNNQ*