ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H3-16-all-fractions_k255_1291315_3

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(395..1165)

Top 3 Functional Annotations

Value Algorithm Source
peptide chain release factor 2 n=1 Tax=Pontibacter roseus RepID=UPI00037E8E65 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 256.0
  • Bit_score: 443
  • Evalue 1.50e-121
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 256.0
  • Bit_score: 455
  • Evalue 3.00e-125
peptide chain release factor 2 similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 256.0
  • Bit_score: 427
  • Evalue 2.30e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 771
GTGGAAGAGCTGGAATTCAAGAAAATGCTCAGCAATGAAGAGGACCAGCTCAGCGCCATTATTGAAATAAATCCGGGAGCGGGAGGAACGGAAAGCTGCGACTGGGCGGAAATGCTCATGCGCATGTACGTGATGTGGGCCGAAGCACACGACTATGGAGTCCGTCAGCTTAACTATAATGCCGGTGAAGTAGCAGGTGTTAAATCCGTAACACTTGAAATCGACGGACAGTTTGCCTACGGTTTTCTGAAATCAGAGATTGGTGTTCACAGACTTGTAAGAGTTTCTCCCTTTGATTCGGGAGGACGCAGACACACTTCTTTTGCTTCCGTGTATGCCTATCCGGTCATTGACGATACGATTACCATTGAAATCAATCCTGCAGACATCGAATGGGATACCTTCAGAGCCGGCGGAGCCGGCGGACAAAATGTAAACAAGGTGGAAACGGCTGTGAGGCTAAAGCATAAGCCATCCGGCCTTATCATTGAATGCCAGCAGGAACGTTCTCAGAACCAGAATAAGGAAAAAGCCCTGAAAATGCTGAAATCAAGATTGTACCAGATCGAGATCGATAAAAGAAACGAAGCCAGGGCTGTGATTGAAAGCGGCAAAAAACGGATTGATTTCGGTTCACAGATCAGAAATTATGTGCTTCACCCCTATAAGCTGGTAAAAGATTTAAGAACGGGCATTGAAAGATCCGATGTACAGAATGTGCTTAATGGTGATCTGGATGTCTATATTAAAGCTTTTCTGATGCAGGCTTAG
PROTEIN sequence
Length: 257
VEELEFKKMLSNEEDQLSAIIEINPGAGGTESCDWAEMLMRMYVMWAEAHDYGVRQLNYNAGEVAGVKSVTLEIDGQFAYGFLKSEIGVHRLVRVSPFDSGGRRHTSFASVYAYPVIDDTITIEINPADIEWDTFRAGGAGGQNVNKVETAVRLKHKPSGLIIECQQERSQNQNKEKALKMLKSRLYQIEIDKRNEARAVIESGKKRIDFGSQIRNYVLHPYKLVKDLRTGIERSDVQNVLNGDLDVYIKAFLMQA*