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H3-16-all-fractions_k255_1817914_6

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(5719..6708)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 329.0
  • Bit_score: 571
  • Evalue 1.30e-160
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 329.0
  • Bit_score: 571
  • Evalue 6.40e-160
DNA-directed RNA polymerase subunit alpha n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=RPOA_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 329.0
  • Bit_score: 571
  • Evalue 4.50e-160

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Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 990
ATGTCTATATTATCATTTCAAATGCCCGAAAAAGTGGTGATGGAGAAAGCAGACGATTTTCATGGTCTGTTTGAATTCAAGCCCCTTGAAAAAGGATATGCAGTAACAATTGGTAATGCCCTGAGAAGAATTTTACTTTCTTCACTTGAAGGGTATGCGATCACCGGTATCAAAATACCAGGAGTATTGCATGAATTCTCTACCATCGAAGGTATCATGGAAGATGTATCTGAAATTATCCTGAATCTTAAAATGGTAAGGTTTAAAAAAGTTTCGGATGCGAATGATAGTAAGATTGTAATTTCAATTAAGAAACAGGATGTGTTCAAAGCGGGAGATATCGCCAAGTTCACTTCAACATACCAGATATTAAATCCGGATTTCGTGATCTGCCACCTTGATTCCGCCAAGAGCTTCGATATCGAACTGACTCTTGAAAAAGGAAGAGGCTACGTTCCGGCCGAAGAAAATAAGCTTTCTGAACAGGTATTCGGATACATTCCGATCGATGCGATCTTCACACCAATCAAGAATGTAAAGTACAGCGTTGAGAACACCCGTGTGGAGCAAAAGACTGACTACGAGAAATTAATTCTGGATATCGAAACTGACGGATCTATCCATCCTGAAGATGCACTGAAAGGCGCAGCGAATATCCTGATCAAGCACTTCATGCTTTTCTCTGATCAGACGATGACCTTCGAAAGCGTGAAAGCCGATGAAGAAGAAACAGTGGACGAAGAAATGCTGCATATGCGCAAGCTTCTGAAGACACCGCTTACAGACCTTGATCTTTCAGTTAGAGCTTACAACTGCCTGAAAGCAGCAGACATCAAAACACTTGGAGATCTTGCTTCGCTTGATATCTCTGATATGATGAAGTTCAGAAATTTCGGTAAAAAATCGCTGGCAGAGCTTGAGCAGCTGATCGCTGAGAAAAATCTGACCTTCGGAATGGATCTTGCAAAATATAAATTAGAAGAAGACTAA
PROTEIN sequence
Length: 330
MSILSFQMPEKVVMEKADDFHGLFEFKPLEKGYAVTIGNALRRILLSSLEGYAITGIKIPGVLHEFSTIEGIMEDVSEIILNLKMVRFKKVSDANDSKIVISIKKQDVFKAGDIAKFTSTYQILNPDFVICHLDSAKSFDIELTLEKGRGYVPAEENKLSEQVFGYIPIDAIFTPIKNVKYSVENTRVEQKTDYEKLILDIETDGSIHPEDALKGAANILIKHFMLFSDQTMTFESVKADEEETVDEEMLHMRKLLKTPLTDLDLSVRAYNCLKAADIKTLGDLASLDISDMMKFRNFGKKSLAELEQLIAEKNLTFGMDLAKYKLEED*