ggKbase home page

H3-16-all-fractions_k255_8827206_2

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: 1337..1936

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JTV5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 199.0
  • Bit_score: 315
  • Evalue 3.50e-83
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:GAL84420.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 195.0
  • Bit_score: 340
  • Evalue 1.10e-90
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 199.0
  • Bit_score: 298
  • Evalue 7.40e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGAAAACCAATTTTGTAAGCGATGCCCAGCTTGTATCGCAGTATATCCAAGGTAACGAAGGTGCTTTTGCTCAGTTGTTGAAAAGACACAAGTCCAAAGTCTACACCACCATTTATCTTATTGTCAAGGATTCCTATATCGCCGAGGATCTTTTACAGGAAACCTTCATCAAGGCGATCAACAAATTAAAATCAGGCAGTTACAACGAGGAAGGCAAGTTCCAGCCCTGGATCACTCGCATAGCCCATAACCTGGCTATAGACTATTTCAGGAGGGAAAAGCGTTATCCTACCATTGTAATGGAAGACGGCAGCAGTGTTTTCAATTCTCTGGCCTTTGCTGAAGATTCTACGGAATCGATACAGATCAAGGATGAAACGCATGCGATTCTGAGAGACCTGATCCAGACACTTCCCGAAGCACAGAAAGAAGTGCTGTTAATGAGACATTATGGCGACATGAGCTTTCAGGAAATTGCTGAAGCTACAGGCGTGAGCATAAATACGGCCTTGGGCAGGATGCGGTATGCCCTTATTAACCTCCGCAAAAAACTAGAACAAAGTAATATAGCCTATGACAAAAACTTTTACCCGGAATGA
PROTEIN sequence
Length: 200
MKTNFVSDAQLVSQYIQGNEGAFAQLLKRHKSKVYTTIYLIVKDSYIAEDLLQETFIKAINKLKSGSYNEEGKFQPWITRIAHNLAIDYFRREKRYPTIVMEDGSSVFNSLAFAEDSTESIQIKDETHAILRDLIQTLPEAQKEVLLMRHYGDMSFQEIAEATGVSINTALGRMRYALINLRKKLEQSNIAYDKNFYPE*