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H3-16-all-fractions_k255_4784645_4

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(2988..3569)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase specialized sigma subunit n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WV6_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 192.0
  • Bit_score: 222
  • Evalue 3.00e-55
RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:GAL86789.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 192.0
  • Bit_score: 258
  • Evalue 7.00e-66
RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 192.0
  • Bit_score: 222
  • Evalue 8.60e-56

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
GTGACTGTGAATAAAAATGATTTAAAAATTATTGAAAGCATCCGGAACGGAGGTAATGATATCGCTTTGACTTATCTGTACGATCAGCCTCTGAAAAAAATAAGAAAATATATTATGGCGAACCAGGGTTCGGTGGAAGACGGGAACGATATATTTCAGGATGCAGTCATCATTTTTTTCAACCAGGTGAAGATGAATAAATATAAAAACGAGCTGGATGTGGATGGTTTCCTTTTCACCGTGGCCCGTAACCTGTGGATTGACAAGGTAAGAAGAGAAAAGAAAATACAGGTGAAGGATTTGAGTCAGGAGACCGGATATGCCGAAGAAGGCGATCACCTGCAAGACCTGATCGGAAGAGAGAAATCAGCGGCGATGCGAAAAGTTTTTGAAAAACTGGATGAAAAATGCCAGAAGATACTCAGATTCGCCATTGATGAAAGATTGAGCATGAAAGAGATCAGCGCGAAGATGGGCTATAGCAACGAGAATGTAGCCAAGAGCAATCATTACCGCTGCAAGCAATACCTGTCAAAGCTGGTCAAGGACGATATAGAATTAGTAAACCTGTTAAGAAATTGA
PROTEIN sequence
Length: 194
VTVNKNDLKIIESIRNGGNDIALTYLYDQPLKKIRKYIMANQGSVEDGNDIFQDAVIIFFNQVKMNKYKNELDVDGFLFTVARNLWIDKVRREKKIQVKDLSQETGYAEEGDHLQDLIGREKSAAMRKVFEKLDEKCQKILRFAIDERLSMKEISAKMGYSNENVAKSNHYRCKQYLSKLVKDDIELVNLLRN*