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H3-16-all-fractions_k255_4978071_1

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(2..541)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 179.0
  • Bit_score: 215
  • Evalue 4.90e-53
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 180.0
  • Bit_score: 188
  • Evalue 1.70e-45
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034ACCA2 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 193
  • Evalue 1.80e-46

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 540
TTGAAATATTTTCTGGATATCGCGTACAATGGCAGCAACTATCATGGATGGCAGGTGCAGGAAAATGCGCATACGGTCCAGCAGGAGCTTAACAACGCGCTTCAGACTCTTTTTCAGCTCCCGGTTGAAACCATGGGAAGCGGGCGCACGGACACAGGCGTTCATGCCGTCCAGCAATTTGTGCAGATGGAGCTTGACAAGACACTAACCGAAGACCATATTTTCAAGCTTAACTGCATTCTTCCTGGCGATATTTACATACGGAATTTTTTCAGGGTAAAGGACGATGCCAGCGTTCGGTTTGATGCGCAGTCCCGTACTTATCATTATAAAATATGCCGGGAAAAGGACCCGTTCCATCGTGGCCTTGCCTACCTATTTTATAAAGACCTGGATATGGAAAAAATGAACAAGGCATCAAAGCTTCTTTTTAAGTACGAAGATTTCCAGTCCTTCAGCAAAGTGAAAACCTCGGTTGATCATTTTCTCTGTGATATAAAAAAGGCGGAATGGAAAAGGAAAAACGGGCTGCTGATTTTT
PROTEIN sequence
Length: 180
LKYFLDIAYNGSNYHGWQVQENAHTVQQELNNALQTLFQLPVETMGSGRTDTGVHAVQQFVQMELDKTLTEDHIFKLNCILPGDIYIRNFFRVKDDASVRFDAQSRTYHYKICREKDPFHRGLAYLFYKDLDMEKMNKASKLLFKYEDFQSFSKVKTSVDHFLCDIKKAEWKRKNGLLIF