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H3-16-all-fractions_k255_4610271_1

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(1..1275)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BX22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 426.0
  • Bit_score: 581
  • Evalue 4.30e-163
RNA-binding protein {ECO:0000313|EMBL:ERM81171.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 426.0
  • Bit_score: 581
  • Evalue 6.10e-163
S1 RNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 421.0
  • Bit_score: 579
  • Evalue 6.10e-163

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Taxonomy

Rhodonellum psychrophilum → Rhodonellum → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1275
ATGGAAAAAGAACATGTAAGGAAGATTGCGGCAGAGCTGAATGCTCCCCAGGATAAGGTAAAGGCCACCATCGAATTGCTGGATGAAGGGGCCACCGTGCCTTTTATCGCCAGGTATCGTAAAGAAATTACCGGTACAATGGATGAAGTTCAGATTACCTCCATCCGTGACAGGATCATTCAACTGAGAGACCTGGATAAAAGAAGAGAGGCAATCCTTAAATCGCTGGAAGAACAGAATAAGCTTAGTCCGGAGCTGAAAGAAAAAGTGGAGAAAGCCGAGACTATGTCCGCCCTCGAAGATATCTATCTTCCCTATAAACCTAAAAGGCGAACCAAAGCCACCATTGCCAAAGAAAAAGGGCTGGAGCCTCTGGCCGTACTTATTTTTGCGCAGGAATTTAAAGATATGGATGCAGAGGCACTGAAGCTGATCGATGCGACCAAAGAATTAAATTCTGCCGAAGACGTGCTGTCCGGCGCAAGAGATATTATAGCCGAATGGATCAATGAAAATGCAGAGGCAAGAAGCAGCATCCGTCAGCTGTTCCTGAACAAGGCCATTGTTTCTTCCCGGCTTATTAAGAGTAAGGAGGAAGAAGCAGCTAAATACAAAGATTACTTCGAATTCTCCGAACCTCTGCATAAAATTCCTTCCCACCGCATGCTGGCTATGAGAAGGGGAGAAAAGGAATTATTCCTGATGATGGATATCGCTCCTGCCGAAGAGGAAGCACTGGAATTGCTGGATACCATGTTTGTGAAGGGCAGGAACCAGGCCTCCGAACAGGTGAAACTGGCGGTGAAAGATTCTTACAAAAGACTGTTGCGCCCATCCATGGAAACTGAAGTCCGTCTGCTCAGCAAAAAGAAAGCCGACGAAGAAGCAATTCGTGTCTTTGCCGACAACCTGCGGCAACTTCTGCTGGCTGCTCCGCTCGGACAAAAAAATGTGCTCGCGCTGGATCCTGGTTTTAGGACCGGTTGTAAAGTGGTTTGCCTGGACAAGCAGGGAAAGCTTTTGGTGAATGAAACGATTTATCCTCACGAGCCGCAGAGAGAGACGGCTAAATCAGGCTCTCTTATTAAGAAGCTTTGTGAGACGTATAAAATTGAAGCTATTGCCATTGGCAACGGAACAGCTGGCCGCGAAACGGAAGCGTTCGTAAAAACTATAGGACTTCCTCCTTCCATACAGGTAGTGATGGTTAACGAAAGTGGCGCATCGGTCTATTCAGCTTCCGATGTGGCCAGAGAGGAATTTCCGGATAAAGAT
PROTEIN sequence
Length: 425
MEKEHVRKIAAELNAPQDKVKATIELLDEGATVPFIARYRKEITGTMDEVQITSIRDRIIQLRDLDKRREAILKSLEEQNKLSPELKEKVEKAETMSALEDIYLPYKPKRRTKATIAKEKGLEPLAVLIFAQEFKDMDAEALKLIDATKELNSAEDVLSGARDIIAEWINENAEARSSIRQLFLNKAIVSSRLIKSKEEEAAKYKDYFEFSEPLHKIPSHRMLAMRRGEKELFLMMDIAPAEEEALELLDTMFVKGRNQASEQVKLAVKDSYKRLLRPSMETEVRLLSKKKADEEAIRVFADNLRQLLLAAPLGQKNVLALDPGFRTGCKVVCLDKQGKLLVNETIYPHEPQRETAKSGSLIKKLCETYKIEAIAIGNGTAGRETEAFVKTIGLPPSIQVVMVNESGASVYSASDVAREEFPDKD