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H3-16-all-fractions_k255_300017

Search features with annotation key words

Displaying items 121-150 of 613 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_300017_121
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(140127..140786)
DNA (660bp) protein (220aa)
50S ribosomal protein L25 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q0_GEMAT
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-16-all-fractions_k255_300017_122
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(141096..142049)
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q1_GEMAT
Ribose-phosphate pyrophosphokinase
H3-16-all-fractions_k255_300017_123
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(142203..143315)
DNA (1113bp) protein (371aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQB7_9FIRM
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:EKP95132.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
sugar ABC transporter ATP-binding protein
H3-16-all-fractions_k255_300017_124
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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143323..144681
DNA (1359bp) protein (453aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373B306
beta-glucosidase
H3-16-all-fractions_k255_300017_125
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(144762..145616)
DNA (855bp) protein (285aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSX8_PSEUU id=5223540 bin=16ft_combo_ws3_JS1 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carbohydrate ABC transporter membrane protein 2, CUT1 family
Tax=RBG_16_RIF_WS3X_71_46_curated
H3-16-all-fractions_k255_300017_126
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(145631..146521)
DNA (891bp) protein (297aa)
ABC-type sugar transport system permease subunit; K10189 lactose/L-arabinose transport system permease protein id=24457718 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC-type sugar transport system permease subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
H3-16-all-fractions_k255_300017_127
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(146518..147861)
DNA (1344bp) protein (448aa)
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B; K10188 lactose/L-arabinose transport system substrate-binding protein id=24457719 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter substrate-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
H3-16-all-fractions_k255_300017_128
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(147858..149363)
DNA (1506bp) protein (502aa)
Tat pathway signal protein n=1 Tax=Rudanella lutea RepID=UPI000381DA02
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_129
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(149415..152396)
DNA (2982bp) protein (994aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037BBCDE
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_130
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(152475..153590)
DNA (1116bp) protein (372aa)
LacI family transcriptional regulator n=2 Tax=Rhodanobacter RepID=I4WNC0_9GAMM id=5223544 bin=16ft_combo_ws3_JS1 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
LacI family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
H3-16-all-fractions_k255_300017_131
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(153603..154511)
DNA (909bp) protein (303aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S6_GEMAT
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
H3-16-all-fractions_k255_300017_132
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(154508..155572)
DNA (1065bp) protein (355aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S7_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD {ECO:0000313|EMBL:AHG90506.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_133
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(155577..157334)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S8_GEMAT
Hpt domain protein
Hpt domain protein {ECO:0000313|EMBL:AHG90507.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_134
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(157495..158355)
DNA (861bp) protein (287aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
H3-16-all-fractions_k255_300017_135
unknown

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158380..158868
DNA (489bp) protein (163aa)

This feature has no annotations

H3-16-all-fractions_k255_300017_136
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(158891..159328)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
methylmalonyl-CoA epimerase
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:AHG90510.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_137
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

159390..159731
DNA (342bp) protein (114aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_138
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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159874..160845
DNA (972bp) protein (324aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-16-all-fractions_k255_300017_139
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

160851..161696
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T3_GEMAT
Ribosomal RNA small subunit methyltransferase I
H3-16-all-fractions_k255_300017_140
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

161693..162436
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T4_GEMAT
protein of unknown function DUF4159
Uncharacterized protein {ECO:0000313|EMBL:AHG90513.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_141
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

162433..166113
DNA (3681bp) protein (1227aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90514.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_142
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

166132..167898
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90515.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_143
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

167895..169169
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90516.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_144
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

169360..171942
DNA (2583bp) protein (861aa)
Putative ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T8_GEMAT
Helicase c2 {ECO:0000313|EMBL:AHG90518.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
helicase c2
H3-16-all-fractions_k255_300017_145
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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171939..172553
DNA (615bp) protein (205aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T9_GEMAT
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AHG90520.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_300017_146
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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172553..173737
DNA (1185bp) protein (395aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I6_GEMAT
aminotransferase
Aminotransferase {ECO:0000313|EMBL:BAH39163.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-16-all-fractions_k255_300017_147
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

173734..174594
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7U0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38300.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-16-all-fractions_k255_300017_148
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(174591..175259)
DNA (669bp) protein (223aa)
LexA repressor {ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|SAAS:SAAS00008054};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
LexA repressor n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3G2_THEOJ
LexA repressor
H3-16-all-fractions_k255_300017_149
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(175390..176826)
DNA (1437bp) protein (479aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glutamate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7U1_GEMAT
glutamyl-tRNA synthetase
H3-16-all-fractions_k255_300017_150
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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177541..179394
DNA (1854bp) protein (618aa)
Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X955_9CHRO
diguanylate cyclase/phosphodiesterase with GAF sensor
Diguanylate cyclase/phosphodiesterase with GAF sensor {ECO:0000313|EMBL:AFZ28629.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
Displaying items 121-150 of 613 in total

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