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H3-16-all-fractions_k255_5633216_17

Organism: H3-16-all-fractions_metab_conc_60

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 11 / 38
Location: 16035..16547

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG28_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 165.0
  • Bit_score: 163
  • Evalue 1.50e-37
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 163.0
  • Bit_score: 169
  • Evalue 4.50e-40
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92678.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 163.0
  • Bit_score: 169
  • Evalue 2.20e-39

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 513
GTGGCTACTACCGTCCACGACCGCTTCGAGCAACGCGTCGTCCCGCTTTTGGACGACGCGTACACGCTCGCGCGTCATCTCATGCGCAACGAGCACGATGCGCAGGACGTCGTGCAGGAGGCGTATCTGCGGGCGTGGCGGCACTTTGCCAAGTTCCGCGATGGAGATGAGAAGGCATGGCTGCTCACGATCGTGCGCAATTGCTGCTATACCTGGCGTCGCAGCCAAAAGGGCCAGGAGGCGGTGTCCTATGACGACGAGCAGCACGGCTTGCGCGAGACGGATCGTCTCGCGACAGACGCGCGAGCCATCGCCGGCTCGGAACGCCAGAGCCTCGCTTCGGCAGTCGCCACGCTGCCAACTGAATTCCGGGAGGCGCTGGTGCTCCGGGAAGTCCAAGGCTTCTCGTATCGAGAAATCGCCGGTATCACCGGAGTCCCAATCGGCACCGTGATGTCACGTCTCGCTCGTGGCCGTGAGCAGCTGCGCCGGGTCCTCAAGCGTATTGCCTAA
PROTEIN sequence
Length: 171
VATTVHDRFEQRVVPLLDDAYTLARHLMRNEHDAQDVVQEAYLRAWRHFAKFRDGDEKAWLLTIVRNCCYTWRRSQKGQEAVSYDDEQHGLRETDRLATDARAIAGSERQSLASAVATLPTEFREALVLREVQGFSYREIAGITGVPIGTVMSRLARGREQLRRVLKRIA*