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H3-16-all-fractions_k255_2443940_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(457..1254)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 261.0
  • Bit_score: 373
  • Evalue 1.60e-100
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 248.0
  • Bit_score: 220
  • Evalue 3.40e-55
tRNA pseudouridine synthase A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDA1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 261.0
  • Bit_score: 373
  • Evalue 1.10e-100

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 798
GTGAAGTTCAAACTGACTATCGCCTACGACGGCACCGGCTACGAAGGGTGGCAGGTGCAGAAGATTGGCACGGGCGTGCAGGAAAAGGTCGAGGACGCGCTGGCGAAATTGTTTCCGAGCAAGCCGCGATTGCATAGTTCCAGCCGCACGGACACGGGCGTGCATGCGCTCGGAATGGTGGCGCATTTCAGCGTGCCGAAGACCGAGTGCAAAATGACGACACGCAAGTTGATGTTGGCGCTCAATCATTGGCTGCCGGAGGACATTCGGGTGCTGTCGGCGGCAGGGGCGGCGGAAAAGTTCCACGCGCGTTTTGATGCCAGGGGGAAGCAGTATCGTTATTTTGTATGGAACCATACGGCGATGAACCCATTGATTCGCGGCACGGCGTGGCATGTGCCGCGTCCGCTGGATTTGAAGGCCATGCGCGCCGCGGCGCCGTTGTTTGTCGGCAAGCATGACTTCAAATCGTTCGCGGCGAATCGGAATTACGAGATGGAGACGACGGTGCGGACGCTGACGCGGTGTGACTTCAAGACGAAAGGGCGGCTGCTTACGTTTACCATCGAGGGCGACGGTTTTCTTTACAAGATGTGCCGTGGAATTGTGGGGACGATTGTGCAGGTTGGACTGGGAAGGTTTCCGGCGAGTGAAATTCAAACGATGCTGGCGCAGAAAGACCGGCGCATGGCGGGGATGACGGCGCCGGCGCAGGGGCTGGTCCTTTGGAGAGTGTTTTATTCCACGCAAAAGCGCAAAAGTGCAAAGACGCAAAGCAAGGAAAGCGTTCAGAAATGA
PROTEIN sequence
Length: 266
VKFKLTIAYDGTGYEGWQVQKIGTGVQEKVEDALAKLFPSKPRLHSSSRTDTGVHALGMVAHFSVPKTECKMTTRKLMLALNHWLPEDIRVLSAAGAAEKFHARFDARGKQYRYFVWNHTAMNPLIRGTAWHVPRPLDLKAMRAAAPLFVGKHDFKSFAANRNYEMETTVRTLTRCDFKTKGRLLTFTIEGDGFLYKMCRGIVGTIVQVGLGRFPASEIQTMLAQKDRRMAGMTAPAQGLVLWRVFYSTQKRKSAKTQSKESVQK*