ggKbase home page

H3-16-all-fractions_k255_2704712_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(137..460)

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 107.0
  • Bit_score: 183
  • Evalue 8.70e-44
Histone family protein DNA-binding protein {ECO:0000313|EMBL:EEF57228.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 107.0
  • Bit_score: 183
  • Evalue 1.20e-43
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 97.0
  • Bit_score: 114
  • Evalue 1.80e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 324
ATGACTCTGACAAAGCGTGACCTGGTGACCCGCATCAGTAATGAAACGGGTCTCGTTCAGCAGCAAGTCCTCGACGTCGTGCAGAGGACTCTTGATTATATCGCCGAGTCGCTCTCCAAAGGCGACAAGGTCGAACTGCGCAATTTCGGCGTGTTCGAAGTCAAGATCCGCAAAGCGCGTGTCGGACGAAATCCCAACTCTCCGGAAACCGACGTCCCCATTCCGCAGCGTTGTGTGGTGAAATTCAAACCCGGCAAGGAGATGCGCGCCGAAGTGATTAAGATTTCGCCCAACGGGCATTCGGCACAGGCGGCCCCGTCCTAA
PROTEIN sequence
Length: 108
MTLTKRDLVTRISNETGLVQQQVLDVVQRTLDYIAESLSKGDKVELRNFGVFEVKIRKARVGRNPNSPETDVPIPQRCVVKFKPGKEMRAEVIKISPNGHSAQAAPS*