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H3-16-all-fractions_k255_3159573_6

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(4022..4414)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPW8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 129.0
  • Bit_score: 194
  • Evalue 4.60e-47
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 129.0
  • Bit_score: 194
  • Evalue 6.40e-47
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 129.0
  • Bit_score: 102
  • Evalue 6.70e-20

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 393
TTTTCCACCTGGCTGTTTACCATCGCGCGGAATCTTTGCCTGAACGAGATTCGCCGTCGCAGCCGTCATCCCGCCGAATCCCTGGACGCGCCGCACCCGGAACAGGCGGACCAGCCGCTGCATCAGTTCGAGGATAAAAAGACATTTTCACCGCCGGAAACTCTCCTGCAAAGCGAGTTGACGCGAAAGATTGACGAAGCATTGGCTGATTTGCCCGAAAACCAGCGCTCGGCCATCCTCCTGTGCCGCCAGGAAGAACTCAGCTACGAGGAAATCGCCGAAGTCCTCGGTTGCTCGATTTCGGCGACCAAGTCGCTGATTCATCGAGGGCGGGAAACGCTTAAGGAACGCTTAAAACCCTACCTGCGGAGCGGTGAATGGGGGGCAGATTGA
PROTEIN sequence
Length: 131
FSTWLFTIARNLCLNEIRRRSRHPAESLDAPHPEQADQPLHQFEDKKTFSPPETLLQSELTRKIDEALADLPENQRSAILLCRQEELSYEEIAEVLGCSISATKSLIHRGRETLKERLKPYLRSGEWGAD*