ggKbase home page

H3-16-all-fractions_k255_3366649_4

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(1490..2236)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7E9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 237.0
  • Bit_score: 285
  • Evalue 3.70e-74
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 247.0
  • Bit_score: 229
  • Evalue 6.90e-58
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 244.0
  • Bit_score: 291
  • Evalue 9.60e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 747
ACTGAACATAAGGCAGAAACAGTTCCCGTCGGTGCAGCGAATTTCACTCCCACCCACTGGAGCGTTGTCCTCGCCGCTGCGGGGCGCAACGACTCGGCGCATGTCAGGGATGCGTTGGAAAAACTCTGCCGCAACTATTGGCTTCCCGCGTATGCCTTCGTGAGGCGGCAGGGCCATGGCCCGCATGACGCGGAGGATTTGACGCAGGAATTCTTCGCGCGGCTGCTCCAAAAGAATTATCTCGCCGATGTCGAACGCGCCAAAGGCCGCTTCCGTTCATTTCTGCTCGCCTCGTTAAAACATTTTCTGGCGAACGAATGGGACAAAGCGAGGGCGCAGAAGCGCGGCGGCGGGCAAGTGCCGGTCTCGATTGATGCGGCGGCCGCCGAAACATCCTTTAGTTTCGAACCAGCGGACCAGCTCACGGCGGAAAAGATTTTCGAGCGCCGCTGGGCGCTGGCATTGCTCGACCAGGTTTTGCGGCGGTTGCGGAACGAATACCTGGCCGACGGCAAGGAGAAGCAGTTCGAGCAGTTGAAGCCGACGCTCACCGAAGCCAGCCGTTCCGTTCCATACGCGGAAATCGCCGCGCGGCTGGCCACCAGCGAGGGCGCCGTAAAGGTGGCGGTGCATCGGCTTCGCCAACGCTATCGCGAACTGCTGCGCGCCGAAATTGCAAATACTGTCGCCAGCCCGGGTGAAATCGAAGACGAAATCCGCAATCTGTTCGCCGCACTCGCAAACTAA
PROTEIN sequence
Length: 249
TEHKAETVPVGAANFTPTHWSVVLAAAGRNDSAHVRDALEKLCRNYWLPAYAFVRRQGHGPHDAEDLTQEFFARLLQKNYLADVERAKGRFRSFLLASLKHFLANEWDKARAQKRGGGQVPVSIDAAAAETSFSFEPADQLTAEKIFERRWALALLDQVLRRLRNEYLADGKEKQFEQLKPTLTEASRSVPYAEIAARLATSEGAVKVAVHRLRQRYRELLRAEIANTVASPGEIEDEIRNLFAALAN*