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H3-16-all-fractions_k255_4671050_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 686..2851

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 724.0
  • Bit_score: 1163
  • Evalue 0.0
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPG3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 724.0
  • Bit_score: 1163
  • Evalue 0.0
glyA; protein-tyrosine-phosphatase, ribose 5-phosphate isomerase and glycine/serine hydroxymethyltransferase similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 737.0
  • Bit_score: 778
  • Evalue 1.50e-222

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2166
ATGAAGACGATTCTATTCGTATGCACCGGCAACGTTTGTCGCAGCCCCATGGCCGAGGGAATCTTTCGCCACGCCATTCAGGGCCACGGCAGTTACCGGGTCGGCTCCGCCGGGCTTGGGGCGATGGAAGGCCAGCCGCCCAGCTTGCATGCCGTCGAAGCCGTGAAGGAACTGGGCATTGATATTTCCAACCAGCGCAGCCGGATGCTCACGCCGGAACTCGTCACCCAGGCCGATTACATCTTCGGCATGACCCACAGCCACGTGGATACCGTCATGCTCTTGTATCCGCAGGCCGCCGAGAAAACCTTTTTGCTTCGCGAATTCGACGACACGCTCGATCCCTTCGAGAAGGACATTAGCGATCCCATAGGCGGCTCGTATGAAGTCTATCTCAACTGCCGCGACCAGATCGAACAGGGCATTTTTTCCTTGTTGCGATTTGTCGAGGGCGATGGTTCGGGTGGAACTATCTCCGGCAAACCTGTGGCGATAGCTTTGGGAGCGGACCACGGCGGCTTCGAACTCAAGGAAACGATCAAGAAATATCTGGAGCAACGAGGCATCAGTGTGGCGGATTTTGGCGCGAATTCGAAGCAACCGGCGGATGATTATCCGGATTTTGCGCAACTGGTCGGCACTAACGTTGCCAATCAAAAAGCCCAACTCGGCGTCCTGCTTTGCACCAGCGGTGTGGGGATGAGCATCGCCGCCAATAAAATTCCGGGTGTCCGCGCCGCCCTCGTTGGTGATGAACAAACCGCCGCGCTCGCCCGCCAGCACAACGACGCCAACGTGATTTGCCTCGGCGCCGCCCACACGCCGCCCGACCTCGCCAAAAAGATTGTCGAGGCTTTCGTGAACGCGCATTTTGAGGGCGGCCGCCACGAGCGGCGAGTTATCAAAATGGAAACACAATTCATTCGCAAAGATTTGAAACTGAAATCCGTCGATCCCGATGTCGCCAACGCCATCGAGCACGAACGCACCCGTCAGCAGGAAAATATTGAGCTCATCGCGAGCGAAAACTTCGTGAGCCCCGCCGTGATGGAAGCGCAAGGCTCCGTGCTCACCAACAAGTACGCCGAAGGTTATCCGAAGAAGCGCTGGTACGGCGGTTGCGAAAATGTGGACGTGATTGAGCAGCTCGCCATTGATCGCGCGAAGAAAATCTTCGGCGCCGAGCACGCCAACGTGCAGCCGCACTCCGGCAGCCAGGCGAACATGGCCTGTTATTTTGCCGTGCTGAAGCCCGGTGACAAAATGCTGACGATGGACTTGAGCCACGGCGGACATTTGACGCACGGCAACAAGGCCAATTTCTCCGGCCGGTTTTTTGAAATCATCCACTACGGCGTCAGCAAGACCGACGAGCGGATTGATTATGATCAGCTCGCGAAGATGGCCCGTGAACACAAGCCGAAGATGATTACCGTGGGCGCCAGCGCGTATCCGCGCATCATTGATTTCAAACGCATGAGCGAAATCGCGCGTGAAGTCGGCGCTTACCTGCTGGCGGACATCGCGCACATTGCGGGCCTCGTCGCGGCGGGCATCCATCCCAGCCCGATTGGCCACGCGGATTTTGTTACGACCACGACCCACAAGACCCTGCGCGGTCCGCGCGGCGGTTTGATTCTGTGCGGTGAGAAATTTGCGAAGGAGATTGATTCGCAGATATTCCCCGGCATTCAAGGCGGACCGCTGGAACACGTCATCGCTGCCAAGGCCGTCTGTTTCCAGGAAGCCCTGCAACCGTCATTCAAGCAGTATCAGGAACAAATCGTGCGCAACGCCCGCGCGCTCGCCGACGGTATGAAGCGCAATGGCTATCGCCTTGTCAGTGGCGGCACGGACAATCACCTGATGCTCGTGGACGTGGGCGCTCGCGGCGTGACTGGCAAAGATTGCCAAATTGCTCTCGACGAAGCCGGCATCACCGTGAACAAAAACACGATCCCGTTTGAAACCCGCTCGCCGTTTCAGGCCAGCGGCGTGCGCCTCGGCACACCGGCGGTCACAACTCGCGGCATGAAGGAAGCCGAGATGGCTGCCATCGGCGACATGATTTCCGAAGTGTTGATGGACATCAAAAACACCGAGACGATTTCCAGGGTGCGCCAGCGCGTGCGAGAGTTGACGTCGAAATTCCCGCTGCCTTATTGA
PROTEIN sequence
Length: 722
MKTILFVCTGNVCRSPMAEGIFRHAIQGHGSYRVGSAGLGAMEGQPPSLHAVEAVKELGIDISNQRSRMLTPELVTQADYIFGMTHSHVDTVMLLYPQAAEKTFLLREFDDTLDPFEKDISDPIGGSYEVYLNCRDQIEQGIFSLLRFVEGDGSGGTISGKPVAIALGADHGGFELKETIKKYLEQRGISVADFGANSKQPADDYPDFAQLVGTNVANQKAQLGVLLCTSGVGMSIAANKIPGVRAALVGDEQTAALARQHNDANVICLGAAHTPPDLAKKIVEAFVNAHFEGGRHERRVIKMETQFIRKDLKLKSVDPDVANAIEHERTRQQENIELIASENFVSPAVMEAQGSVLTNKYAEGYPKKRWYGGCENVDVIEQLAIDRAKKIFGAEHANVQPHSGSQANMACYFAVLKPGDKMLTMDLSHGGHLTHGNKANFSGRFFEIIHYGVSKTDERIDYDQLAKMAREHKPKMITVGASAYPRIIDFKRMSEIAREVGAYLLADIAHIAGLVAAGIHPSPIGHADFVTTTTHKTLRGPRGGLILCGEKFAKEIDSQIFPGIQGGPLEHVIAAKAVCFQEALQPSFKQYQEQIVRNARALADGMKRNGYRLVSGGTDNHLMLVDVGARGVTGKDCQIALDEAGITVNKNTIPFETRSPFQASGVRLGTPAVTTRGMKEAEMAAIGDMISEVLMDIKNTETISRVRQRVRELTSKFPLPY*