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H3-16-all-fractions_k255_8209250_7

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 5574..6047

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 156.0
  • Bit_score: 255
  • Evalue 2.80e-65
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIA9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 156.0
  • Bit_score: 255
  • Evalue 2.00e-65
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 155.0
  • Bit_score: 189
  • Evalue 6.60e-46

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 474
ATGGTTCACGTTGGCATTGGCTATGATGTTCACCAGTTGGTCGCCGGACGCAAACTCATCCTCGGCGGCGTGGAAATTCCACACACCAAAGGTCTCGACGGCCATTCGGATGCCGACGCGCTCATGCACGCCATTTGCGACGCCGTCCTCGGCGCGCTCGGTGAGGAAGACATCGGCCATTTCTTTCCCAACACTGATCCGCGCTGGAAAGGCGCCCCCAGCAAAGTCTTCCTGCAGGAAGCCGCGCGGCAAGTCGCCTTCAAGCAGGGAAAAATCGTGAACATCGACGCCACGGTCATCGCACAAGCCCCGAAAATTTACCCCCACATTCGCGAGATGAAAACCCGCATCGCCGAAGCACTCGGCCTTAACGTCCAGCAAGTCGGCGTCAAAGCCACCACCAACGAACTAATGGGTTTCATTGGCCGCGAAGAAGGCATCGCCGCCATGGCCGTGGCGAGTATAGATTATTAA
PROTEIN sequence
Length: 158
MVHVGIGYDVHQLVAGRKLILGGVEIPHTKGLDGHSDADALMHAICDAVLGALGEEDIGHFFPNTDPRWKGAPSKVFLQEAARQVAFKQGKIVNIDATVIAQAPKIYPHIREMKTRIAEALGLNVQQVGVKATTNELMGFIGREEGIAAMAVASIDY*