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H3-16-all-fractions_k255_237932_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 587..2320

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEF2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 483.0
  • Bit_score: 459
  • Evalue 3.40e-126
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF61666.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 483.0
  • Bit_score: 459
  • Evalue 4.70e-126
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 273.0
  • Bit_score: 204
  • Evalue 5.50e-50

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1734
ATGACGAGCGAGGACATGGAGTTGGTGCGGCAATATGCCCATCAACAATCCGAGAAAGCGTTTGAAACGCTTGTTTCGCGGCATGTCAACCTCGTCTATTCCGCGGCCATCCGGCAGGTGGGCGATCCAACTTTAGCGGAGGAAATCACGCAAGCGGTGTTCATCATTCTGGCGCGCAAGGCTGCAAGTCTTGGGTCTCGGACAATCCTGCCGGGCTGGCTGTATCGCACCACGTGTTATGCGGCCAGGGACGTCTTGCGGGCGCGACGCCGCCGTGAACGTCACGAACAACAGGCGTATATGCAATCGACTCTCAACGCTGCGCAAACCGATTCGACGTGGGAACAACTTTCACCACTGCTGGACGCTGCGATGACGCAACTTCGACAGGACGACCGGGATGCGCTGCTGCTGCGCTTCTTTGAAGGGAAAAGCTTGCGGGAAGTTGGCGAGGCTTTTGGCACCACTGAAGATGCAGCCAAGAAGCGAGTGAGCCGGGCACTGGAAAAGTTGCGCAAAATGTTTGCGAAACGCGGGGTGAGTTCCACGACGGCAATTATCGGAGAAACGATTTCCACACATTCGATACAAGTGGCGCCAGTGGCGTTGGCGAAGTCTGTGACTGCCATGGCGGCAGCAAAGGGCCTGGCGGCGAGCGGGTCCATTTCAGTTCTTGTGAAAGGAGCGTTGAAACTTATGGCATGGACGAATGCGAAAATGGCGATTGTGGCCGGTGTTGCTGTTGTTGTCGCCGCCGGGACGGCAACCATAGTGGTGAAAGAGACAAAAGGGCACCACGGTGCCAATTGGCAGGAGAAATACGATCCGGCCCTTCTTGAGAGCATGCCGCCGCAGATCACTATTGTGTCATCGCTGCCGTCCACAGTGTCGTCGGGGCTGCATGCCGTGTGGCAGGGTCGCAGTGCCAAAATGATGGGGCTGGGCCAGAGTATTCCGGACATTGTTATGTTGGCTTACTATCCGCGATATCATCTGTCGCAGTTAAGCTTTTCCGCGAGTGTGCCGCAGGGGAAATTTGATTTTCTGGCGACGCTGCCGGGTGGCACGCGGGCGGAGCAACGCGGTTTACAGGGGGAATTGCAACGGCAATTCGGGCTCCTTGGACGGCCAGAAACGATGGAAGTGGATTGCCTGGCGTTGCGCCTGAAATCCAGCAACGCGCCCGGCCTGAAACGCGCTTCCCTGCCCTTTGCCGGTTCCGAGCAGGAGGATTCTTATTCCGCACACAACCAGCCTCTTTGGCCGCTGGTGGATTATCTGAGCGCACACCTGGGCATGGCGGTGATTGACCAAACAAAATTGGTGGGCAACTACGACATTGATTTCAAATGGGACAAAACGGCGGATGGTTTGAAGGAAGCGTTGCTGGAGCAGACCGGGCTGGAACTGGTAACAGGCAAGCAGCCGATTGAATTTCTAATCGTGGAAGACTCGAACCAGTCCCTCGTGGGGATTGGAGCGGCGCTGGCACCGGACAACGAAACACACGAAATTCGAATCACCAAGGTATTTCCCAATACGCCGGCGTCGGAGGCGGGCCTGACCGCGGGCTGCATCATCCGCAGTATTGACGACATAGCAACGCTGGATATGAAGTTGGCAGCCTGCATCAATCTTATTCGCGGTGGACCGGGAACAAAGGTGCGGCTGGAGATTGTCATGCCGAGGCGCACACAAACCAACATGATTGAGTTGGTCCGGCGCGAAATTCAA
PROTEIN sequence
Length: 578
MTSEDMELVRQYAHQQSEKAFETLVSRHVNLVYSAAIRQVGDPTLAEEITQAVFIILARKAASLGSRTILPGWLYRTTCYAARDVLRARRRRERHEQQAYMQSTLNAAQTDSTWEQLSPLLDAAMTQLRQDDRDALLLRFFEGKSLREVGEAFGTTEDAAKKRVSRALEKLRKMFAKRGVSSTTAIIGETISTHSIQVAPVALAKSVTAMAAAKGLAASGSISVLVKGALKLMAWTNAKMAIVAGVAVVVAAGTATIVVKETKGHHGANWQEKYDPALLESMPPQITIVSSLPSTVSSGLHAVWQGRSAKMMGLGQSIPDIVMLAYYPRYHLSQLSFSASVPQGKFDFLATLPGGTRAEQRGLQGELQRQFGLLGRPETMEVDCLALRLKSSNAPGLKRASLPFAGSEQEDSYSAHNQPLWPLVDYLSAHLGMAVIDQTKLVGNYDIDFKWDKTADGLKEALLEQTGLELVTGKQPIEFLIVEDSNQSLVGIGAALAPDNETHEIRITKVFPNTPASEAGLTAGCIIRSIDDIATLDMKLAACINLIRGGPGTKVRLEIVMPRRTQTNMIELVRREIQ