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H3-16-all-fractions_k255_295246_6

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 3673..4575

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 300.0
  • Bit_score: 462
  • Evalue 2.90e-127
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIH4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 300.0
  • Bit_score: 462
  • Evalue 2.10e-127
rsmH; 16S rRNA (N4-methyl-C1402)-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 306.0
  • Bit_score: 280
  • Evalue 5.40e-73

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 903
ATGATGGCGGAGGCGTTGGACGCGCTGAAGCCGAAACCGGGCGGTCGCTACGCCGACGGGACCCTCGGTGGGGCTGGACACGCGGCGGCCATATTGGCCACGAGTTCGCCAACTGGATGGTTGTATGGATGCGATCGCGATGGCGCCGCGGTTGAAGCGGCGAAGCGGCGATTGGCCCAATTCGCCGGGCGCTTTGAAATCCGGCGCGGAGATTTTGCGGAACTGGCGGACTGGGTGCCGCCGGGAAGTTGCGACGGGGTGCTCTTTGACCTGGGCGTGAGTTCGCCGCAACTGGACGTGGCTGAACGCGGCTTCAGCTTCCAGCAGGAAGGCCCGCTGGATATGCGGATGGATTCGCGGCAGCCGACGACCGCGGCGGACCTGGTGAACAACGCGAGCGCCGAAGAGCTGGCAAAGATTTTTTGGGAATACGGCGGCGAACGGGATTCGCGCCGGTTTGCAAAAGCGATTGTTCACGACCGCGAGTTGCGCTGGTTTAAGACGACGAAGCAGTTGGCGGATTTGATTGAGAAAATTTCGCCGCGCCACGGGCGCAAGGCGCATCCGGCGACGAAGGTTTTTCAGGCACTGCGGATTGCAGTGAATGACGAGATTGGTTCTTTGAAACGCGGGTTGGATGGGGCGCTGAAGATTTTGCGGCCCGGCGGGCGATTGGCGGTGATTACCTTCCATTCGCTGGAAGACCGGGTGGTGAAGGATTTCGGGCGCGCGCGGGCGCGGGATTACACGTTCGCGGGAGAAGTGGACGTTCCCGAATTACGCGAACCGCGCACGCCCGAGATGCGAATGGTGACGCGCAAGGCAGTTCTGCCGGGAGAAGCGGAACTCGCGGAAAACCCGCGCAGCCGCAGCGCGCAATTGAGAGTGATGGAAAAGATTTAA
PROTEIN sequence
Length: 301
MMAEALDALKPKPGGRYADGTLGGAGHAAAILATSSPTGWLYGCDRDGAAVEAAKRRLAQFAGRFEIRRGDFAELADWVPPGSCDGVLFDLGVSSPQLDVAERGFSFQQEGPLDMRMDSRQPTTAADLVNNASAEELAKIFWEYGGERDSRRFAKAIVHDRELRWFKTTKQLADLIEKISPRHGRKAHPATKVFQALRIAVNDEIGSLKRGLDGALKILRPGGRLAVITFHSLEDRVVKDFGRARARDYTFAGEVDVPELREPRTPEMRMVTRKAVLPGEAELAENPRSRSAQLRVMEKI*