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H3-16-all-fractions_k255_307946_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 1327..2196

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase HpnD n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH10_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 287.0
  • Bit_score: 414
  • Evalue 8.10e-113
Squalene synthase HpnD {ECO:0000313|EMBL:EEF60931.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 287.0
  • Bit_score: 414
  • Evalue 1.10e-112
squalene/phytoene synthase similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 278.0
  • Bit_score: 247
  • Evalue 3.70e-63

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 870
ATGCAAGAAAGCCGGACGATTACCCAAAAAAGCGCTTCCAATCTCGCGCTGGCGTTCATCCTCTTGCCAAAACCAAAACGCGACGCCATGTCCGCTCTCTACGCGTTTTGCCGCGAAGTGGATGACGTCGCTGACGAAGATCAGGTGCCGGTGGAAACACGTCGCGAACAACTCGCCGCCTGGCGTTCGGACGTGCGCAAAGCGTGCGACAACGCGGGCCCGCAGTTTCCCGTAAACCGCGAGTTCCAGCCCGTCATTCACGAGTTTTGTTTGCCGTTCACGCTCTTTGATGAACTGATCCAGGGCTGCGAAATGGATTTGCAAACCAAGCGTTACCAGACCTACGAACAGCTTGAACTCTACTGCTATCGTGTCGCATCCGTGGTCGGTTTGTTGAGTATCGAAATCTTCGGCTATCGCAATCCTGCCTGCCGCGAGTACGCGGTTTACCTCGGCAAAGCCCTGCAACTGACCAACATTCTTCGCGACGTGCGCACGGACGCGGAACGCGGAAGGATTTACCTGCCGCAATCCGAACTCGCGCGCTTCAATGTCACTGAAAAAGAAATCCTGAACTTCGAATACTCTGATCGCTTCCGAGACCTCGCGAGCAGCGTCGCCGGGCGGGCGAAGAAATTTTACCAACTCGCGCGCGAGACGCTGCCGGCGGAAGACCGCCGCTCGATGGTTGCGGCCGAACTCATGGGCGCGGTTTACTGGCGGCTGTTGCGAAAATTGGAACGGCAACAATTCGACGTTTTTGGCCCCACCCCGACCCGCCTGGGCAAGGGCCAAAAGATCCTGCTGATCTTTCGTTCGTGGTTTCGCTTCGTCTTCCGCGCAACGTCGCCCAATTATGGCATTGTCTGA
PROTEIN sequence
Length: 290
MQESRTITQKSASNLALAFILLPKPKRDAMSALYAFCREVDDVADEDQVPVETRREQLAAWRSDVRKACDNAGPQFPVNREFQPVIHEFCLPFTLFDELIQGCEMDLQTKRYQTYEQLELYCYRVASVVGLLSIEIFGYRNPACREYAVYLGKALQLTNILRDVRTDAERGRIYLPQSELARFNVTEKEILNFEYSDRFRDLASSVAGRAKKFYQLARETLPAEDRRSMVAAELMGAVYWRLLRKLERQQFDVFGPTPTRLGKGQKILLIFRSWFRFVFRATSPNYGIV*